RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 RIPK3Q9Y572 518 aa9.64□□□□□ -0.87
TMEM116-209ENST00000550020 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 ERICH4A6NGS2 130 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SPDYE16A6NNV3 312 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SART1O43290 800 aaKnown RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 ATG7O95352 703 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SLC25A27O95847 323 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SYF2O95926 243 aaKnown RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 EGFRP00533 1210 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 PIGRP01833 764 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 OATP04181 439 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 GLI1P08151 1106 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 ABCB4P21439 1286 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 HSPA9P38646 679 aaKnown RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 EFNA5P52803 228 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 EMC2Q15006 297 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 PSMD6Q15008 389 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 PWP2Q15269 919 aaKnown RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SURF1Q15526 300 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 RUFY4Q6ZNE9 571 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 CBWD2Q8IUF1 395 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 RIOX2Q8IUF8 465 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 ARHGEF19Q8IW93 802 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 CD302Q8IX05 232 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 ARFGAP2Q8N6H7 521 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 TCP11Q8WWU5 503 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 CCDC127Q96BQ5 260 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 DCPSQ96C86 337 aaKnown RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SH3GL2Q99962 352 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 NIFKQ9BYG3 293 aaKnown RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 FAM107BQ9H098 131 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 THAP2Q9H0W7 228 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 POLR3FQ9H1D9 316 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 IKZF4Q9H2S9 585 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 TMEM134Q9H6X4 195 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 GPRC5CQ9NQ84 441 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 PDLIM7Q9NR12 457 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 GGA3Q9NZ52 723 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 ARHGAP28Q9P2N2 729 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 GTF3C4Q9UKN8 822 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 NFU1Q9UMS0 254 aa9.63□□□□□ -0.87
TMEM116-209ENST00000550020 PACSIN2Q9UNF0 486 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
TMEM116-209ENST00000550020 GOLGA8IPA6NC78 632 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 GOLGA8JA6NMD2 632 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 HMGB1P1B2RPK0 211 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 ANKRD63C9JTQ0 380 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 K7ERI5 159 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PODXLO00592 558 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 RAD51CO43502 376 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PHACTR2O75167 634 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 STBD1O95210 358 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 FGGP02679 453 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 CYP1A2P05177 515 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 ADRB2P07550 413 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 MYBL2P10244 700 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 CYP11B1P15538 503 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 TBXAS1P24557 533 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 CTNNA2P26232 953 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 CHRNA3P32297 505 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 MAN1A1P33908 653 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 NF2P35240 595 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 IREB2P48200 963 aaKnown RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PTENP60484 403 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 CLDN10P78369 228 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 ZSCAN26Q16670 478 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 C1orf220Q5T0J3 134 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 ACAD10Q6JQN1 1059 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 GSPT2Q8IYD1 628 aaKnown RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 RNPC3Q96LT9 517 aaKnown RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 IMPG2Q9BZV3 1241 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PORCNQ9H237 461 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 AZI2Q9H6S1 392 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 SMARCAL1Q9NZC9 954 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 EHD2Q9NZN4 543 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 NOCTQ9UK39 431 aaKnown RBP9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PCDHB2Q9Y5E7 798 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 STYXL1Q9Y6J8 313 aa9.62□□□□□ -0.87
TMEM116-209ENST00000550020 PHIPQ8WWQ0 1821 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 ZNF541Q9H0D2 1346 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 DDX3YO15523 660 aaKnown RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 CYP26A1O43174 497 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 SPOPO43791 374 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 ZNF862O60290 1169 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 ADSSP30520 456 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 CETN2P41208 172 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 SLC1A1P43005 524 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 CARSP49589 748 aaKnown RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 ALDH5A1P51649 535 aaPredicted RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 DRG2P55039 364 aaKnown RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 EIF3BP55884 814 aaKnown RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 RNASE9P60153 205 aaKnown RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 IRX3P78415 501 aaPredicted RBP9.61□□□□□ -0.87
TMEM116-209ENST00000550020 DR1Q01658 176 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 GRM1Q13255 1194 aa9.61□□□□□ -0.87
TMEM116-209ENST00000550020 BIRC3Q13489 604 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms