RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 MIOSQ9NXC5 875 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 CDH7Q9ULB5 785 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 SPTBN2O15020 2390 aa15.12■□□□□ 0.01
CDX2-202ENST00000548877 LRRN2O75325 713 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 NR1I2O75469 434 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 KRT37O76014 449 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 TDP2O95551 362 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 POU2F2P09086 479 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 SPATA31D3P0C874 917 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 FSHRP23945 695 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 HOXA9P31269 272 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 RFC5P40937 340 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 QARSP47897 775 aaKnown RBP15.11■□□□□ 0.01
CDX2-202ENST00000548877 ATXN1P54253 815 aaKnown RBP15.11■□□□□ 0.01
CDX2-202ENST00000548877 NPEPPSP55786 919 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
CDX2-202ENST00000548877 POU5F1BQ06416 359 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 PPP2R5CQ13362 524 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 PLA2G4FQ68DD2 849 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 FUT10Q6P4F1 479 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 SPATA31D4Q6ZUB0 917 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 FERMT3Q86UX7 667 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 FAM177A1Q8N128 213 aaPredicted RBP15.11■□□□□ 0.01
CDX2-202ENST00000548877 ZNF579Q8NAF0 562 aaKnown RBP15.11■□□□□ 0.01
CDX2-202ENST00000548877 GSTCDQ8NEC7 633 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 TCP11Q8WWU5 503 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 FGF14Q92915 247 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 KCNB2Q92953 911 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 BCO2Q9BYV7 579 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 GPR62Q9BZJ7 368 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 RNF39Q9H2S5 420 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 VPS54Q9P1Q0 977 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 GIT1Q9Y2X7 761 aa15.11■□□□□ 0.01
CDX2-202ENST00000548877 NOTCH4Q99466 2003 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 PRR5-ARHGAP8B1AHC4 643 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 F8W810 466 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 EML1O00423 815 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 LAMTOR5O43504 91 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 TSPAN1O60635 241 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 HNRNPA1P09651 372 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDX2-202ENST00000548877 SRGAP2CP0DJJ0 459 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 EVCP57679 992 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 PTENP60484 403 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 ARHGAP8P85298 464 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 MLF2Q15773 248 aaPredicted RBP15.1■□□□□ 0.01
CDX2-202ENST00000548877 NOTUMQ6P988 496 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 PARM1Q6UWI2 310 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 MTSS1LQ765P7 747 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 C4orf19Q8IY42 314 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 TMEM143Q96AN5 459 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 CLDN23Q96B33 292 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 ZFP42Q96MM3 310 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 EIF2AQ9BY44 585 aaKnown RBP15.1■□□□□ 0.01
CDX2-202ENST00000548877 CSRNP2Q9H175 543 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 FBXW11Q9UKB1 542 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 VAV3Q9UKW4 847 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 PCDHA4Q9UN74 947 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 ARID2Q68CP9 1835 aa15.1■□□□□ 0.01
CDX2-202ENST00000548877 P4HBP07237 508 aaKnown RBP15.09■□□□□ 0.01
CDX2-202ENST00000548877 MYBP10242 640 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 TGM1P22735 817 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 MLH1P40692 756 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 SCNN1GP51170 649 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 PFKPQ01813 784 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 SLC44A4Q53GD3 710 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 Q6ZUG5 572 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 RNF149Q8NC42 400 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 DAGLBQ8NCG7 672 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 BRF1Q92994 677 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 CEP170P1Q96L14 293 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 FAM20AQ96MK3 541 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 NELL2Q99435 816 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 SPATA6Q9NWH7 488 aaPredicted RBP15.09■□□□□ 0.01
CDX2-202ENST00000548877 ZSCAN32Q9NX65 697 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 WRAP73Q9P2S5 460 aaPredicted RBP15.09■□□□□ 0.01
CDX2-202ENST00000548877 NCDNQ9UBB6 729 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 ADAM28Q9UKQ2 775 aa15.09■□□□□ 0.01
CDX2-202ENST00000548877 NAP1L2Q9ULW6 460 aaPredicted RBP15.09■□□□□ 0.01
CDX2-202ENST00000548877 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
CDX2-202ENST00000548877 TBC1D4O60343 1298 aa15.08■□□□□ 0
CDX2-202ENST00000548877 ERLIN2O94905 339 aa15.08■□□□□ 0
CDX2-202ENST00000548877 RPS9P46781 194 aaKnown RBP15.08■□□□□ 0
CDX2-202ENST00000548877 NLRP5P59047 1200 aa15.08■□□□□ 0
CDX2-202ENST00000548877 FGD1P98174 961 aa15.08■□□□□ 0
CDX2-202ENST00000548877 LMNB2Q03252 620 aa15.08■□□□□ 0
CDX2-202ENST00000548877 SNW1Q13573 536 aaKnown RBP15.08■□□□□ 0
CDX2-202ENST00000548877 NPY5RQ15761 445 aa15.08■□□□□ 0
CDX2-202ENST00000548877 BMP2KLQ5H9B9 411 aa15.08■□□□□ 0
CDX2-202ENST00000548877 GRASPQ7Z6J2 395 aaPredicted RBP15.08■□□□□ 0
CDX2-202ENST00000548877 ATRIPQ8WXE1 791 aa15.08■□□□□ 0
CDX2-202ENST00000548877 FGF13Q92913 245 aa15.08■□□□□ 0
CDX2-202ENST00000548877 B3GALT6Q96L58 329 aa15.08■□□□□ 0
CDX2-202ENST00000548877 RTKNQ9BST9 563 aa15.08■□□□□ 0
CDX2-202ENST00000548877 SLC26A6Q9BXS9 759 aa15.08■□□□□ 0
CDX2-202ENST00000548877 KCNMB3Q9NPA1 279 aa15.08■□□□□ 0
CDX2-202ENST00000548877 LTB4R2Q9NPC1 389 aa15.08■□□□□ 0
CDX2-202ENST00000548877 MTF2Q9Y483 593 aaPredicted RBP15.08■□□□□ 0
CDX2-202ENST00000548877 COL4A3Q01955 1670 aa15.07■□□□□ 0
CDX2-202ENST00000548877 FAM170BA6NMN3 283 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms