RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TMC7Q7Z402 723 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 ADAMTS19Q8TE59 1207 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 AUTS2Q8WXX7 1259 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 LARP4BQ92615 738 aaKnown RBP17.36■□□□□ 0.37
DDX54-205ENST00000548786 RABGGTAQ92696 567 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 PABPC5Q96DU9 382 aaKnown RBP17.36■□□□□ 0.37
DDX54-205ENST00000548786 ADPGKQ9BRR6 497 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 TIPINQ9BVW5 301 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 TARS2Q9BW92 718 aaKnown RBP17.36■□□□□ 0.37
DDX54-205ENST00000548786 CCSER1Q9C0I3 900 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 CXCL16Q9H2A7 254 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 TLE6Q9H808 572 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 ARHGAP28Q9P2N2 729 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 CACNG4Q9UBN1 327 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 TTC28Q96AY4 2481 aa17.36■□□□□ 0.37
DDX54-205ENST00000548786 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.35■□□□□ 0.37
DDX54-205ENST00000548786 HIDE1A8MVS5 230 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 F8W810 466 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 SPTLC2O15270 562 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 SLC26A4O43511 780 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 RECQL4O94761 1208 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 FAM13AO94988 1023 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 OR1G1P47890 313 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 OSTNP61366 133 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 DLX2Q07687 328 aaPredicted RBP17.35■□□□□ 0.37
DDX54-205ENST00000548786 RRAGBQ5VZM2 374 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 KCTD17Q8N5Z5 321 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 PPP2R3CQ969Q6 453 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 IGSF21Q96ID5 467 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 RPS6KC1Q96S38 1066 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 KCND2Q9NZV8 630 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 KANSL3Q9P2N6 904 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 LZTS1Q9Y250 596 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 GIT1Q9Y2X7 761 aa17.35■□□□□ 0.37
DDX54-205ENST00000548786 A0A087X0B3 334 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 TDRD15B5MCY1 1934 aaKnown RBP17.34■□□□□ 0.37
DDX54-205ENST00000548786 FSCN2O14926 492 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 TBX10O75333 385 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 TBCAO75347 108 aaKnown RBP17.34■□□□□ 0.37
DDX54-205ENST00000548786 NDUFV1P49821 464 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 SMTNP53814 917 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 ZNF568Q3ZCX4 644 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 LLGL2Q6P1M3 1020 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 DYMQ7RTS9 669 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 VPS52Q8N1B4 723 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 MYCT1Q8N699 235 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 PDILTQ8N807 584 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 CEP120Q8N960 986 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 TMEM161BQ8NDZ6 487 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 RSPH1Q8WYR4 309 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 ACO2Q99798 780 aaKnown RBP17.34■□□□□ 0.37
DDX54-205ENST00000548786 VN1R3Q9BXE9 311 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 MRPL4Q9BYD3 311 aaKnown RBP17.34■□□□□ 0.37
DDX54-205ENST00000548786 ANKFY1Q9P2R3 1169 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 FAN1Q9Y2M0 1017 aa17.34■□□□□ 0.37
DDX54-205ENST00000548786 K7ENM7 598 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 NRP1O14786 923 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 MAPTP10636 758 aaKnown RBP17.33■□□□□ 0.36
DDX54-205ENST00000548786 BMP1P13497 986 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 DDIT3P35638 169 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 LTBRP36941 435 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 STAT6P42226 847 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 STRN3Q13033 797 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 GIT2Q14161 759 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 DCAF4L1Q3SXM0 396 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 COLGALT2Q8IYK4 626 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 GSTCDQ8NEC7 633 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.33■□□□□ 0.36
DDX54-205ENST00000548786 SPIRE2Q8WWL2 714 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 BICD1Q96G01 975 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 CHAMP1Q96JM3 812 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 ZBTB45Q96K62 511 aaPredicted RBP17.33■□□□□ 0.36
DDX54-205ENST00000548786 UHRF1Q96T88 793 aaPredicted RBP17.33■□□□□ 0.36
DDX54-205ENST00000548786 TCHPQ9BT92 498 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 CDT1Q9H211 546 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 TMEM134Q9H6X4 195 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 C17orf75Q9HAS0 396 aa17.33■□□□□ 0.36
DDX54-205ENST00000548786 BARX2Q9UMQ3 279 aaPredicted RBP17.33■□□□□ 0.36
DDX54-205ENST00000548786 RBM19Q9Y4C8 960 aaKnown RBP17.33■□□□□ 0.36
DDX54-205ENST00000548786 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.32■□□□□ 0.36
DDX54-205ENST00000548786 ALDH2P05091 517 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 DNM1Q05193 864 aaKnown RBP17.32■□□□□ 0.36
DDX54-205ENST00000548786 SMC1AQ14683 1233 aaKnown RBP17.32■□□□□ 0.36
DDX54-205ENST00000548786 LEXMQ3ZCV2 418 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 GLRA4Q5JXX5 417 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 PTCRAQ6ISU1 281 aaPredicted RBP17.32■□□□□ 0.36
DDX54-205ENST00000548786 TMEM175Q9BSA9 504 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 PARVGQ9HBI0 331 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 MARCH5Q9NX47 278 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 LARSQ9P2J5 1176 aaKnown RBP17.32■□□□□ 0.36
DDX54-205ENST00000548786 STK17AQ9UEE5 414 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 ODF2LQ9ULJ1 636 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 TNFSF13BQ9Y275 285 aa17.32■□□□□ 0.36
DDX54-205ENST00000548786 CASTOR2A6NHX0 329 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 C2CD2LO14523 706 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 PTGESO14684 152 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 INPPL1O15357 1258 aa17.31■□□□□ 0.36
DDX54-205ENST00000548786 YEATS4O95619 227 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms