RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 COG1Q8WTW3 980 aa22.65■■□□□ 1.22
RITA1-201ENST00000548278 KREMEN1Q96MU8 473 aa22.65■■□□□ 1.22
RITA1-201ENST00000548278 TARS2Q9BW92 718 aaKnown RBP22.65■■□□□ 1.22
RITA1-201ENST00000548278 AGO2Q9UKV8 859 aaKnown RBP22.65■■□□□ 1.22
RITA1-201ENST00000548278 GRID2IPA4D2P6 1211 aa22.64■■□□□ 1.22
RITA1-201ENST00000548278 PSMD6Q15008 389 aa22.64■■□□□ 1.22
RITA1-201ENST00000548278 SLFN12LQ6IEE8 588 aa22.64■■□□□ 1.22
RITA1-201ENST00000548278 ABRAQ8N0Z2 381 aa22.64■■□□□ 1.22
RITA1-201ENST00000548278 ZBTB45Q96K62 511 aaPredicted RBP22.64■■□□□ 1.22
RITA1-201ENST00000548278 RPGRIP1Q96KN7 1286 aa22.64■■□□□ 1.22
RITA1-201ENST00000548278 TSKSQ9UJT2 592 aa22.64■■□□□ 1.22
RITA1-201ENST00000548278 TULP1O00294 542 aaPredicted RBP22.64■■□□□ 1.21
RITA1-201ENST00000548278 GAS2O43903 313 aaKnown RBP22.64■■□□□ 1.21
RITA1-201ENST00000548278 SLC26A2P50443 739 aa22.64■■□□□ 1.21
RITA1-201ENST00000548278 NLRP11P59045 1033 aaKnown RBP22.64■■□□□ 1.21
RITA1-201ENST00000548278 SPRYD7Q5W111 196 aa22.64■■□□□ 1.21
RITA1-201ENST00000548278 TAPT1Q6NXT6 567 aa22.64■■□□□ 1.21
RITA1-201ENST00000548278 CRELD2Q6UXH1 353 aaPredicted RBP22.64■■□□□ 1.21
RITA1-201ENST00000548278 SMARCAD1Q9H4L7 1026 aa22.64■■□□□ 1.21
RITA1-201ENST00000548278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.64■■□□□ 1.21
RITA1-201ENST00000548278 RAB20Q9NX57 234 aa22.64■■□□□ 1.21
RITA1-201ENST00000548278 STRNO43815 780 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 ARHGAP1Q07960 439 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 C15orf39Q6ZRI6 1047 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 EXOC8Q8IYI6 725 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 FAM71AQ8IYT1 594 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 C2orf69Q8N8R5 385 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 CAGE1Q8TC20 777 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 HELQQ8TDG4 1101 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 TCP11Q8WWU5 503 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 ZNF516Q92618 1163 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 ARID3AQ99856 593 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 AGPAT1Q99943 283 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 RRAGCQ9HB90 399 aa22.63■■□□□ 1.21
RITA1-201ENST00000548278 A0A0A6YYK5 440 aaPredicted RBP22.62■■□□□ 1.21
RITA1-201ENST00000548278 A0A0B4J269 797 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 CELF2O95319 508 aaKnown RBP22.62■■□□□ 1.21
RITA1-201ENST00000548278 GALCP54803 685 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 ZNF572Q7Z3I7 529 aaPredicted RBP22.62■■□□□ 1.21
RITA1-201ENST00000548278 PPM1KQ8N3J5 372 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 SUGCTQ9HAC7 445 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 ADGRA2Q96PE1 1338 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 FTCDO95954 541 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 TNFAIP3P21580 790 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 ACOT2P49753 483 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 WNT7BP56706 349 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 LAMTOR4Q0VGL1 99 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 PRPF4BQ13523 1007 aaKnown RBP22.62■■□□□ 1.21
RITA1-201ENST00000548278 MEI1Q5TIA1 1274 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 CDCA2Q69YH5 1023 aaPredicted RBP22.62■■□□□ 1.21
RITA1-201ENST00000548278 MAMDC4Q6UXC1 1216 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 SLC20A1Q8WUM9 679 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 SHC3Q92529 594 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 NT5C1BQ96P26 610 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 PNKPQ96T60 521 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 CCDC113Q9H0I3 377 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 VTA1Q9NP79 307 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 RAB21Q9UL25 225 aa22.62■■□□□ 1.21
RITA1-201ENST00000548278 RHOXF2BP0C7M4 288 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 ZBTB48P10074 688 aaPredicted RBP22.61■■□□□ 1.21
RITA1-201ENST00000548278 EFNA5P52803 228 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 MFAP3P55082 362 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 MXD4Q14582 209 aaPredicted RBP22.61■■□□□ 1.21
RITA1-201ENST00000548278 IFI16Q16666 785 aaKnown RBP22.61■■□□□ 1.21
RITA1-201ENST00000548278 ZNF467Q7Z7K2 595 aaPredicted RBP22.61■■□□□ 1.21
RITA1-201ENST00000548278 PALB2Q86YC2 1186 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 LRRC71Q8N4P6 559 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 LRRC57Q8N9N7 239 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 PSMB7Q99436 277 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 PTPN18Q99952 460 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 RHOXF2Q9BQY4 288 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 MSTO1Q9BUK6 570 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 RBM47A0AV96 593 aaKnown RBP22.61■■□□□ 1.21
RITA1-201ENST00000548278 ZRANB2O95218 330 aaKnown RBP eCLIP22.61■■□□□ 1.21
RITA1-201ENST00000548278 LDHAP00338 332 aaKnown RBP22.61■■□□□ 1.21
RITA1-201ENST00000548278 CXCR5P32302 372 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 LAMC2Q13753 1193 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 ZBTB41Q5SVQ8 909 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 TMCO3Q6UWJ1 677 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 ZPBP2Q6X784 338 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 FAM84AQ96KN4 292 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 KATNBL1Q9H079 304 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 ANKFY1Q9P2R3 1169 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 TRPC6Q9Y210 931 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 IVNS1ABPQ9Y6Y0 642 aa22.61■■□□□ 1.21
RITA1-201ENST00000548278 TTLL13PA6NNM8 815 aa22.6■■□□□ 1.21
RITA1-201ENST00000548278 HBP1O60381 514 aa22.6■■□□□ 1.21
RITA1-201ENST00000548278 MSCO60682 206 aa22.6■■□□□ 1.21
RITA1-201ENST00000548278 NOP2P46087 812 aaKnown RBP22.6■■□□□ 1.21
RITA1-201ENST00000548278 GJC2Q5T442 439 aaPredicted RBP22.6■■□□□ 1.21
RITA1-201ENST00000548278 TPCN2Q8NHX9 752 aa22.6■■□□□ 1.21
RITA1-201ENST00000548278 TRAPPC12Q8WVT3 735 aa22.6■■□□□ 1.21
RITA1-201ENST00000548278 TMEM253P0C7T8 217 aa22.59■■□□□ 1.21
RITA1-201ENST00000548278 BRD3Q15059 726 aa22.59■■□□□ 1.21
RITA1-201ENST00000548278 CC2D1AQ6P1N0 951 aaPredicted RBP22.59■■□□□ 1.21
RITA1-201ENST00000548278 GPR142Q7Z601 462 aa22.59■■□□□ 1.21
RITA1-201ENST00000548278 FNBP1Q96RU3 617 aa22.59■■□□□ 1.21
RITA1-201ENST00000548278 PARK7Q99497 189 aaKnown RBP22.59■■□□□ 1.21
RITA1-201ENST00000548278 JPH2Q9BR39 696 aaPredicted RBP22.59■■□□□ 1.21
RITA1-201ENST00000548278 PDE11AQ9HCR9 933 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms