RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 TIAM1Q13009 1591 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 DIP2AQ14689 1571 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 AHDC1Q5TGY3 1603 aaPredicted RBP3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 UBR1Q8IWV7 1749 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 CENPVL1A0A0U1RR11 272 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 FSBPO95073 299 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 TYRP1P17643 537 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 BMPR1AP36894 532 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 MXRA7P84157 204 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 SSRP1Q08945 709 aaKnown RBP3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 RASGRF1Q13972 1273 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 ACAP1Q15027 740 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 VPS72Q15906 364 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 ARMC6Q6NXE6 501 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 CCDC62Q6P9F0 684 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 OVCH1Q7RTY7 1134 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 PLXDC1Q8IUK5 500 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 C2orf69Q8N8R5 385 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 LINC00476Q8WZB0 136 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 CAVIN3Q969G5 261 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 MAGEB10Q96LZ2 347 aaPredicted RBP3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 DHRS4Q9BTZ2 278 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 SPATA5L1Q9BVQ7 753 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 ACSS2Q9NR19 701 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 SYBUQ9NX95 663 aa3.59□□□□□ -1.83
DEPDC4-204ENST00000547823 MIA2Q96PC5 1412 aa3.59□□□□□ -1.84
DEPDC4-204ENST00000547823 INO80Q9ULG1 1556 aaPredicted RBP3.59□□□□□ -1.84
DEPDC4-204ENST00000547823 KDM5AP29375 1690 aaKnown RBP3.59□□□□□ -1.84
DEPDC4-204ENST00000547823 CDC42BPAQ5VT25 1732 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 PDPK1O15530 556 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 CYP17A1P05093 508 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 HLA-DOAP06340 250 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 SPATA31D3P0C874 917 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 HSPA6P17066 643 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 HK1P19367 917 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 MTERF2Q49AM1 385 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 FAM209AQ5JX71 171 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 ABHD17BQ5VST6 288 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 FOXB2Q5VYV0 432 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 SPATA31D4Q6ZUB0 917 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 DOK3Q7L591 496 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 OTOP1Q7RTM1 612 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 DEFB132Q7Z7B7 95 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 SLC43A3Q8NBI5 491 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 GSTCDQ8NEC7 633 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 OR52N2Q8NGI0 321 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 GMLQ99445 158 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 CPPED1Q9BRF8 314 aaPredicted RBP3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 NDC1Q9BTX1 674 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 PPP1R1BQ9UD71 204 aaPredicted RBP3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 HDAC5Q9UQL6 1122 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 MSRB2Q9Y3D2 182 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 MRPS23Q9Y3D9 190 aaKnown RBP3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 SPAG9O60271 1321 aaKnown RBP3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 BCL9LQ86UU0 1499 aa3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 SCAF11Q99590 1463 aaKnown RBP3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 PRDM15P57071 1507 aaPredicted RBP3.58□□□□□ -1.84
DEPDC4-204ENST00000547823 ABCC3O15438 1527 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 HOXA3O43365 443 aaPredicted RBP3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 DNAJC6O75061 913 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 RASGRP1O95267 797 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 KCNA6P17658 529 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 CXCR5P32302 372 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 RGS3P49796 1198 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 MSH6P52701 1360 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 ANTXR2P58335 489 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 ADCY1Q08828 1119 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 TROQ12816 1431 aaPredicted RBP3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 TRIM61Q5EBN2 209 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 GDF7Q7Z4P5 450 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 CXorf67Q86X51 503 aaPredicted RBP3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 BOLLQ8N9W6 283 aaKnown RBP3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 CAGE1Q8TC20 777 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 SMG7Q92540 1137 aaKnown RBP3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 UIMC1Q96RL1 719 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 WDR11Q9BZH6 1224 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 EPC1Q9H2F5 836 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 RSAD1Q9HA92 442 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 DNAI1Q9UI46 699 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 COQ6Q9Y2Z9 468 aa3.57□□□□□ -1.84
DEPDC4-204ENST00000547823 CHD4Q14839 1912 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 BRWD3Q6RI45 1802 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 LRRIQ1Q96JM4 1722 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 SLIT1O75093 1534 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 SYCP2Q9BX26 1530 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 NCOA2Q15596 1464 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 ARHGAP23Q9P227 1491 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 CLIP1P30622 1438 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 BLMP54132 1417 aaPredicted RBP3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 CCDC163A0A0D9SF12 145 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 AHRRA9YTQ3 701 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 B4E1Z4 1266 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 DIAPH1O60610 1272 aaKnown RBP3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 ZFP36P26651 326 aaKnown RBP3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 SEC24CP53992 1094 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 GUCY1B3Q02153 619 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 NHLH1Q02575 133 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 MAPK7Q13164 816 aa3.56□□□□□ -1.84
DEPDC4-204ENST00000547823 EPHA7Q15375 998 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms