RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 KIAA0319Q5VV43 1072 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 CABP7Q86V35 215 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 PPFIBP1Q86W92 1011 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 PBXIP1Q96AQ6 731 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 ASIC4Q96FT7 647 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 MFSD14AQ96MC6 490 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 FBXL18Q96ME1 805 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 NECTIN4Q96NY8 510 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 EMILIN2Q9BXX0 1053 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 PRMT7Q9NVM4 692 aaPredicted RBP14.77□□□□□ -0.05
CPSF6-204ENST00000547486 DZANK1Q9NVP4 752 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 CACNG4Q9UBN1 327 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 LRWD1Q9UFC0 647 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 PARP2Q9UGN5 583 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 ARID2Q68CP9 1835 aa14.77□□□□□ -0.05
CPSF6-204ENST00000547486 TEX28O15482 410 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
CPSF6-204ENST00000547486 CCT6AP40227 531 aaKnown RBP14.76□□□□□ -0.05
CPSF6-204ENST00000547486 PDIA5Q14554 519 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 IER5LQ5T953 404 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 KIAA1841Q6NSI8 718 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 B3GALT6Q96L58 329 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 PRIMPOLQ96LW4 560 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 RIPOR3Q96MK2 946 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 RPS6KC1Q96S38 1066 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 PAAF1Q9BRP4 392 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 KIFC3Q9BVG8 833 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 HERC2P3Q9BVR0 1158 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 GPR62Q9BZJ7 368 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 CCDC113Q9H0I3 377 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 BHMT2Q9H2M3 363 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 PDZD7Q9H5P4 517 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 CHST7Q9NS84 486 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 STK39Q9UEW8 545 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 NOL7Q9UMY1 257 aaKnown RBP14.76□□□□□ -0.05
CPSF6-204ENST00000547486 KIAA1024Q9UPX6 916 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 NR2E1Q9Y466 385 aa14.76□□□□□ -0.05
CPSF6-204ENST00000547486 PP2D1A8MPX8 630 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 CD2BP2O95400 341 aaKnown RBP14.75□□□□□ -0.05
CPSF6-204ENST00000547486 MYBP10242 640 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 LIG1P18858 919 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 MUTP22033 750 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 SIGLEC14Q08ET2 396 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 PRPF4BQ13523 1007 aaKnown RBP14.75□□□□□ -0.05
CPSF6-204ENST00000547486 EEF1DP3Q658K8 133 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 GPR149Q86SP6 731 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 ZBTB8OSQ8IWT0 167 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 HACE1Q8IYU2 909 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 IGSF22Q8N9C0 903 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 KREMEN2Q8NCW0 462 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 COLEC11Q9BWP8 271 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 SMOC2Q9H3U7 446 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 RXFP1Q9HBX9 757 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 DDX19AQ9NUU7 478 aaKnown RBP14.75□□□□□ -0.05
CPSF6-204ENST00000547486 SNTG2Q9NY99 539 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 LIMD1Q9UGP4 676 aa14.75□□□□□ -0.05
CPSF6-204ENST00000547486 ACKR2O00590 384 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 PTGESO14684 152 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 PRKCBP05771 671 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 URODP06132 367 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 SPATA31D3P0C874 917 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 CDC25AP30304 524 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 NAMPTP43490 491 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 GLUD2P49448 558 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 DSG1Q02413 1049 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 MAPK6Q16659 721 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 NT5DC1Q5TFE4 455 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 HAUS3Q68CZ6 603 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 SPATA31D4Q6ZUB0 917 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 DEPTORQ8TB45 409 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 C2orf40Q9H1Z8 148 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 SFXN1Q9H9B4 322 aa14.74□□□□□ -0.05
CPSF6-204ENST00000547486 E9PMD0 336 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 NR1I2O75469 434 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 BRD1O95696 1058 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 ASGR2P07307 311 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 IGFBP6P24592 240 aaPredicted RBP14.73□□□□□ -0.05
CPSF6-204ENST00000547486 GRIK3Q13003 919 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 RABEP1Q15276 862 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 NAB2Q15742 525 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 FUT10Q6P4F1 479 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 ZBTB33Q86T24 672 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 ZDHHC14Q8IZN3 488 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 FBXL6Q8N531 539 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 SNX29Q8TEQ0 813 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 MMTAG2Q9BU76 263 aaKnown RBP14.73□□□□□ -0.05
CPSF6-204ENST00000547486 MAN1C1Q9NR34 630 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.73□□□□□ -0.05
CPSF6-204ENST00000547486 SSX2IPQ9Y2D8 614 aa14.73□□□□□ -0.05
CPSF6-204ENST00000547486 CASTOR2A6NHX0 329 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 N4BP3O15049 544 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 TADA2AO75478 443 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 RECQL4O94761 1208 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 PDGFBP01127 241 aaPredicted RBP14.72□□□□□ -0.05
CPSF6-204ENST00000547486 RPL17P18621 184 aaKnown RBP14.72□□□□□ -0.05
CPSF6-204ENST00000547486 NHLH1Q02575 133 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 TUSC3Q13454 348 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 TMEM132AQ24JP5 1023 aa14.72□□□□□ -0.05
CPSF6-204ENST00000547486 KCNK18Q7Z418 384 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms