RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 CXCL14O95715 111 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 CD44P16070 742 aaKnown RBP11.4□□□□□ -0.58
BEST3-208ENST00000547208 AKAP5P24588 427 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 NAMPTP43490 491 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 SCNN1GP51170 649 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 NCBP1Q09161 790 aaKnown RBP11.4□□□□□ -0.58
BEST3-208ENST00000547208 CBX2Q14781 532 aaPredicted RBP11.4□□□□□ -0.58
BEST3-208ENST00000547208 PTPN14Q15678 1187 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 RILPL1Q5EBL4 403 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 MCTP1Q6DN14 999 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 KCNK18Q7Z418 384 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 DAW1Q8N136 415 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 SNX29Q8TEQ0 813 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 SLC22A17Q8WUG5 538 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 POP1Q99575 1024 aaKnown RBP11.4□□□□□ -0.58
BEST3-208ENST00000547208 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 PDZD7Q9H5P4 517 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 POLD4Q9HCU8 107 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 CDH22Q9UJ99 828 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 USP20Q9Y2K6 914 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 GIT1Q9Y2X7 761 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 KIF3AQ9Y496 699 aa11.4□□□□□ -0.58
BEST3-208ENST00000547208 KMT2EQ8IZD2 1858 aa11.4□□□□□ -0.59
BEST3-208ENST00000547208 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.39□□□□□ -0.59
BEST3-208ENST00000547208 DCXO43602 365 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 ALDH2P05091 517 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 ALADP13716 330 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 HOXB8P17481 243 aaPredicted RBP11.39□□□□□ -0.59
BEST3-208ENST00000547208 MAPK7Q13164 816 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 CUL4AQ13619 759 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 GIT2Q14161 759 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 HERC4Q5GLZ8 1057 aaPredicted RBP11.39□□□□□ -0.59
BEST3-208ENST00000547208 HYIQ5T013 277 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 DTHD1Q6ZMT9 781 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 TAS1R1Q7RTX1 841 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 RNF135Q8IUD6 432 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 ZBTB8OSQ8IWT0 167 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 FEZF2Q8TBJ5 459 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 CASP10Q92851 521 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 APOL6Q9BWW8 343 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 APOL5Q9BWW9 433 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 PHF7Q9BWX1 381 aaPredicted RBP11.39□□□□□ -0.59
BEST3-208ENST00000547208 RAB34Q9BZG1 259 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 TRIM6Q9C030 488 aaPredicted RBP11.39□□□□□ -0.59
BEST3-208ENST00000547208 C2orf40Q9H1Z8 148 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 CXCL16Q9H2A7 254 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 FAN1Q9Y2M0 1017 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 ARIH1Q9Y4X5 557 aaPredicted RBP11.39□□□□□ -0.59
BEST3-208ENST00000547208 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
BEST3-208ENST00000547208 DOCK6Q96HP0 2047 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 ANK1P16157 1881 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 ACKR2O00590 384 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 N4BP3O15049 544 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 PRKCBP05771 671 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 SRGAP2BP0DMP2 458 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 EPCAMP16422 314 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 PRPF4BQ13523 1007 aaKnown RBP11.38□□□□□ -0.59
BEST3-208ENST00000547208 GSE1Q14687 1217 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 PPP2R5AQ15172 486 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 MAPK6Q16659 721 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 NT5DC1Q5TFE4 455 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 KRT79Q5XKE5 535 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 EEF1DP3Q658K8 133 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 RINT1Q6NUQ1 792 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 C1orf186Q6ZWK4 172 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 DEPTORQ8TB45 409 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 KIFAP3Q92845 792 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 FAM193BQ96PV7 902 aaPredicted RBP11.38□□□□□ -0.59
BEST3-208ENST00000547208 RUSC1Q9BVN2 902 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 ADAM7Q9H2U9 754 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 KLK14Q9P0G3 267 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 CACNG4Q9UBN1 327 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 STK39Q9UEW8 545 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 MUTYHQ9UIF7 546 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 SMC3Q9UQE7 1217 aa11.38□□□□□ -0.59
BEST3-208ENST00000547208 PRG3Q9Y2Y8 225 aaPredicted RBP11.38□□□□□ -0.59
BEST3-208ENST00000547208 DOCK8Q8NF50 2099 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 PRR33A8MZF0 331 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 H3BQV1 296 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 PTGESO14684 152 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 HIP1RO75146 1068 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 SOD2P04179 222 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 SSBP05455 408 aaKnown RBP eCLIP11.37□□□□□ -0.59
BEST3-208ENST00000547208 CNPP09543 421 aaKnown RBP11.37□□□□□ -0.59
BEST3-208ENST00000547208 OR1G1P47890 313 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 GRIK3Q13003 919 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
BEST3-208ENST00000547208 NAB2Q15742 525 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 IER5LQ5T953 404 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 KIAA0319Q5VV43 1072 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 LARP1BQ659C4 914 aaKnown RBP11.37□□□□□ -0.59
BEST3-208ENST00000547208 ARL6IP4Q66PJ3 421 aaKnown RBP11.37□□□□□ -0.59
BEST3-208ENST00000547208 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 HFE2Q6ZVN8 426 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 TAS1R3Q7RTX0 852 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 HACE1Q8IYU2 909 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 KLHL5Q96PQ7 755 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 HERC2P3Q9BVR0 1158 aa11.37□□□□□ -0.59
BEST3-208ENST00000547208 CHST7Q9NS84 486 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms