RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 SFXN1Q9H9B4 322 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 TUFT1Q9NNX1 390 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 MRPL17Q9NRX2 175 aaKnown RBP20.7■□□□□ 0.9
CHERP-204ENST00000546538 KLK14Q9P0G3 267 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 LIMD1Q9UGP4 676 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 DBR1Q9UK59 544 aaKnown RBP20.7■□□□□ 0.9
CHERP-204ENST00000546538 LIMCH1Q9UPQ0 1083 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 SORCS3Q9UPU3 1222 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 GIT1Q9Y2X7 761 aa20.7■□□□□ 0.9
CHERP-204ENST00000546538 NBR1Q14596 966 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 PPP4R3CPQ6ZMV5 832 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 SUGP1Q8IWZ8 645 aaKnown RBP20.69■□□□□ 0.9
CHERP-204ENST00000546538 C4orf32Q8N8J7 132 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 TDRD5Q8NAT2 981 aaKnown RBP20.69■□□□□ 0.9
CHERP-204ENST00000546538 TMEM87AQ8NBN3 555 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 PAAF1Q9BRP4 392 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 POLR3CQ9BUI4 534 aaPredicted RBP20.69■□□□□ 0.9
CHERP-204ENST00000546538 EMILIN2Q9BXX0 1053 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 GPR62Q9BZJ7 368 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 FZD8Q9H461 694 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 RXFP1Q9HBX9 757 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 CHST7Q9NS84 486 aa20.69■□□□□ 0.9
CHERP-204ENST00000546538 CFAP54Q96N23 3096 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 LRRIQ4A6NIV6 560 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 N4BP1O75113 896 aaKnown RBP20.68■□□□□ 0.9
CHERP-204ENST00000546538 MYBP10242 640 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 AVPR2P30518 371 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 DSG1Q02413 1049 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 SLC27A1Q6PCB7 646 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 ZBTB33Q86T24 672 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 POLD4Q9HCU8 107 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 MAN1C1Q9NR34 630 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 USTQ9Y2C2 406 aa20.68■□□□□ 0.9
CHERP-204ENST00000546538 URODP06132 367 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 OR52Z1P0C646 297 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 MTMR3Q13615 1198 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 FBXO18Q8NFZ0 1043 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 C8orf76Q96K31 380 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 CCDC43Q96MW1 224 aaKnown RBP20.67■□□□□ 0.9
CHERP-204ENST00000546538 CCDC113Q9H0I3 377 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 PDZD7Q9H5P4 517 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 STK39Q9UEW8 545 aa20.67■□□□□ 0.9
CHERP-204ENST00000546538 RFPL2O75678 378 aa20.66■□□□□ 0.9
CHERP-204ENST00000546538 RPA1P27694 616 aa20.66■□□□□ 0.9
CHERP-204ENST00000546538 GLUD2P49448 558 aa20.66■□□□□ 0.9
CHERP-204ENST00000546538 FAM187BQ17R55 369 aa20.66■□□□□ 0.9
CHERP-204ENST00000546538 PADI6Q6TGC4 694 aa20.66■□□□□ 0.9
CHERP-204ENST00000546538 NACC1Q96RE7 527 aa20.66■□□□□ 0.9
CHERP-204ENST00000546538 LLPHQ9BRT6 129 aaKnown RBP20.66■□□□□ 0.9
CHERP-204ENST00000546538 TRIM6Q9C030 488 aaPredicted RBP20.66■□□□□ 0.9
CHERP-204ENST00000546538 FOXP1Q9H334 677 aaPredicted RBP20.66■□□□□ 0.9
CHERP-204ENST00000546538 PTGESO14684 152 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 SPATA31D3P0C874 917 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 TOB1P50616 345 aaPredicted RBP20.65■□□□□ 0.9
CHERP-204ENST00000546538 NCBP1Q09161 790 aaKnown RBP20.65■□□□□ 0.9
CHERP-204ENST00000546538 NAB2Q15742 525 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 FUT10Q6P4F1 479 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 SPATA31D4Q6ZUB0 917 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 UBALD2Q8IYN6 164 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 MCPH1Q8NEM0 835 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 CMASQ8NFW8 434 aaPredicted RBP20.65■□□□□ 0.9
CHERP-204ENST00000546538 ZNF707Q96C28 371 aaPredicted RBP20.65■□□□□ 0.9
CHERP-204ENST00000546538 KIFC3Q9BVG8 833 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 DOCK8Q8NF50 2099 aa20.65■□□□□ 0.9
CHERP-204ENST00000546538 ZFHX2Q9C0A1 2572 aaPredicted RBP20.65■□□□□ 0.9
CHERP-204ENST00000546538 ZMYM2Q9UBW7 1377 aa20.64■□□□□ 0.9
CHERP-204ENST00000546538 PAPLNO95428 1278 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 CYP11B2P19099 503 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 IGFBP6P24592 240 aaPredicted RBP20.64■□□□□ 0.89
CHERP-204ENST00000546538 GRIK3Q13003 919 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 SAFBQ15424 915 aaKnown RBP eCLIP20.64■□□□□ 0.89
CHERP-204ENST00000546538 TTC38Q5R3I4 469 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 EEF1DP3Q658K8 133 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 C15orf39Q6ZRI6 1047 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 TMEM105Q8N8V8 129 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 PRIMPOLQ96LW4 560 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 PRMT7Q9NVM4 692 aaPredicted RBP20.64■□□□□ 0.89
CHERP-204ENST00000546538 PARP2Q9UGN5 583 aa20.64■□□□□ 0.89
CHERP-204ENST00000546538 ADH1AP07327 375 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 RPL17P18621 184 aaKnown RBP20.63■□□□□ 0.89
CHERP-204ENST00000546538 PTPN5P54829 565 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 C8orf34Q49A92 452 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 CCDC149Q6ZUS6 474 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 NOSTRINQ8IVI9 506 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 COLEC11Q9BWP8 271 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 FAM86C1Q9NVL1 165 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 SNTG2Q9NY99 539 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 ADAM28Q9UKQ2 775 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 DOCK6Q96HP0 2047 aa20.63■□□□□ 0.89
CHERP-204ENST00000546538 MTCL1Q9Y4B5 1905 aaKnown RBP20.63■□□□□ 0.89
CHERP-204ENST00000546538 CCDC195A0A1B0GUA6 201 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 GLUD1P00367 558 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 FXR2P51116 673 aaKnown RBP eCLIP20.62■□□□□ 0.893e-12■■■■□ 25.1
CHERP-204ENST00000546538 ORC2Q13416 577 aaPredicted RBP20.62■□□□□ 0.89
CHERP-204ENST00000546538 IL17AQ16552 155 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 RTP2Q5QGT7 225 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 LILRA6Q6PI73 481 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 PLCD3Q8N3E9 789 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 VWA8A3KMH1 1905 aa20.62■□□□□ 0.89
CHERP-204ENST00000546538 CASTOR2A6NHX0 329 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms