RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.96□□□□□ -0.34
CCDC38-202ENST00000546386 SUCLA2Q9P2R7 463 aaPredicted RBP12.96□□□□□ -0.34
CCDC38-202ENST00000546386 MYO1AQ9UBC5 1043 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 CDC23Q9UJX2 597 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 PNMA2Q9UL42 364 aa12.96□□□□□ -0.34
CCDC38-202ENST00000546386 SMPD1P17405 629 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 ICAM3P32942 547 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 STAT1P42224 750 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
CCDC38-202ENST00000546386 EHBP1Q8NDI1 1231 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 HDAC7Q8WUI4 952 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 ANKRD7Q92527 254 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 PARD6BQ9BYG5 372 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 NRBP2Q9NSY0 501 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 AIPL1Q9NZN9 384 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 ARHGAP28Q9P2N2 729 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 AGO2Q9UKV8 859 aaKnown RBP12.95□□□□□ -0.34
CCDC38-202ENST00000546386 AKT3Q9Y243 479 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 SAR1BQ9Y6B6 198 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 C5orf42Q9H799 3197 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 CST3P01034 146 aaPredicted RBP12.95□□□□□ -0.34
CCDC38-202ENST00000546386 ZNF200P98182 395 aaPredicted RBP12.95□□□□□ -0.34
CCDC38-202ENST00000546386 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 CRELD2Q6UXH1 353 aaPredicted RBP12.95□□□□□ -0.34
CCDC38-202ENST00000546386 SCARA5Q6ZMJ2 495 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 MROH8Q9H579 483 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 SETD4Q9NVD3 440 aa12.95□□□□□ -0.34
CCDC38-202ENST00000546386 MYCP01106 439 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-202ENST00000546386 MMEP08473 750 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 CD58P19256 250 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 SOX5P35711 763 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 CLCN6P51797 869 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 GUCY2FP51841 1108 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 JAM2P57087 298 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 PPARDQ03181 441 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 TAF1CQ15572 869 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-202ENST00000546386 EEF1DP3Q658K8 133 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 ARHGEF26Q96DR7 871 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 THAP2Q9H0W7 228 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 RBAKQ9NYW8 714 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-202ENST00000546386 A0A087WZ62 844 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 CLDN3O15551 220 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 COPB2P35606 906 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 AMPD2Q01433 879 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 CYP24A1Q07973 514 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 KIZQ2M2Z5 673 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 NAA35Q5VZE5 725 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 FAM160B1Q5W0V3 765 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 AADACL2Q6P093 401 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 MAMDC4Q6UXC1 1216 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 GPD1LQ8N335 351 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 SAMD3Q8N6K7 520 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 FDXACB1Q9BRP7 624 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-202ENST00000546386 PCDH10Q9P2E7 1040 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 PNMA3Q9UL41 463 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 ABT1Q9ULW3 272 aaKnown RBP12.94□□□□□ -0.34
CCDC38-202ENST00000546386 EYSQ5T1H1 3165 aa12.94□□□□□ -0.34
CCDC38-202ENST00000546386 IGKV6D-21A0A0A0MT36 114 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 STAM2O75886 525 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
CCDC38-202ENST00000546386 LGALS2P05162 132 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 ARL2P36404 184 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 GALCP54803 685 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 ARHGAP1Q07960 439 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 PDE4CQ08493 712 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 TARBP2Q15633 366 aaKnown RBP12.93□□□□□ -0.34
CCDC38-202ENST00000546386 RPUSD2Q8IZ73 545 aaKnown RBP12.93□□□□□ -0.34
CCDC38-202ENST00000546386 NTPCRQ9BSD7 190 aaKnown RBP12.93□□□□□ -0.34
CCDC38-202ENST00000546386 XIRP2A4UGR9 3374 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 ZNF233A6NK53 670 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 TFAMQ00059 246 aaKnown RBP12.93□□□□□ -0.34
CCDC38-202ENST00000546386 ZNF792Q3KQV3 632 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 FAM182AQ5T1J6 154 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 TDRD10Q5VZ19 366 aaKnown RBP12.93□□□□□ -0.34
CCDC38-202ENST00000546386 DPH6Q7L8W6 267 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 GOLGA5Q8TBA6 731 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 SCFD2Q8WU76 684 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 MAML3Q96JK9 1138 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 MTMR12Q9C0I1 747 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 RAB20Q9NX57 234 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 HES2Q9Y543 173 aa12.93□□□□□ -0.34
CCDC38-202ENST00000546386 GJB6O95452 261 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 HTRA3P83110 453 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 PRPF4BQ13523 1007 aaKnown RBP12.92□□□□□ -0.34
CCDC38-202ENST00000546386 SRGAP1Q7Z6B7 1085 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 NOP9Q86U38 636 aaKnown RBP12.92□□□□□ -0.34
CCDC38-202ENST00000546386 RDM1Q8NG50 284 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 MKNK1Q9BUB5 465 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 TLR10Q9BXR5 811 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 STK33Q9BYT3 514 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 GRID2IPA4D2P6 1211 aa12.92□□□□□ -0.34
CCDC38-202ENST00000546386 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
CCDC38-202ENST00000546386 PHACTR2O75167 634 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms