RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TAOK3Q9H2K8 898 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 PABPC3Q9H361 631 aaKnown RBP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 CDC42EP4Q9H3Q1 356 aaKnown RBP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 NKIRAS1Q9NYS0 192 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.71■□□□□ 0.11
HOXC11-202ENST00000546378 MCM8Q9UJA3 840 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 ANAPC7Q9UJX3 599 aa15.71■□□□□ 0.11
HOXC11-202ENST00000546378 EPHA7Q15375 998 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 SGSM1Q2NKQ1 1148 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 CERKLQ49MI3 558 aaPredicted RBP15.7■□□□□ 0.1
HOXC11-202ENST00000546378 PREPLQ4J6C6 727 aaPredicted RBP15.7■□□□□ 0.1
HOXC11-202ENST00000546378 CC2D2BQ6DHV5 1058 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 HHIPL2Q6UWX4 724 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 CEP63Q96MT8 703 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 SLC16A4O15374 487 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 MAP3K6O95382 1288 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 FERP16591 822 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 IRX4P78413 519 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
HOXC11-202ENST00000546378 MAPK7Q13164 816 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 SEZ6Q53EL9 994 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 CYP4X1Q8N118 509 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 PRELID2Q8N945 189 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 DAGLBQ8NCG7 672 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 C2orf71A6NGG8 1288 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 CCDC188H7C350 402 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 MSH4O15457 936 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 GH2P01242 217 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 ECE1P42892 770 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 FBXO11Q86XK2 927 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 ZDHHC14Q8IZN3 488 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 ACTRT1Q8TDG2 376 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 ATP8B4Q8TF62 1192 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 PITPNM3Q9BZ71 974 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 ASTN1O14525 1302 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 ABCB11O95342 1321 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 NID2Q14112 1375 aa15.7■□□□□ 0.1
HOXC11-202ENST00000546378 RASA4BC9J798 803 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 RASA4O43374 803 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 LCA5LO95447 670 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 RARAP10276 462 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 KRT10P13645 584 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ETS1P14921 441 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ATP11AP98196 1134 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ZBTB16Q05516 673 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 CXCL9Q07325 125 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 PDIA5Q14554 519 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ERMARDQ5T6L9 678 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 THEMIS2Q5TEJ8 643 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ZNF365Q70YC5 407 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 SPATS2Q86XZ4 545 aaKnown RBP15.69■□□□□ 0.1
HOXC11-202ENST00000546378 FBXO28Q9NVF7 368 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 KLHL14Q9P2G3 628 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 KDM3AQ9Y4C1 1321 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 DUOX1Q9NRD9 1551 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 SLX4Q8IY92 1834 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 A0A0G2JND7 137 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 MTMR2Q13614 643 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 LRRC36Q1X8D7 754 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 FAM102BQ5T8I3 360 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 EXOC3L1Q86VI1 746 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 CDAN1Q8IWY9 1227 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ZDHHC15Q96MV8 337 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 MTUS1Q9ULD2 1270 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ZMYND8Q9ULU4 1186 aaPredicted RBP15.69■□□□□ 0.1
HOXC11-202ENST00000546378 SUN1O94901 812 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ECEL1O95672 775 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 BMP3P12645 472 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 SLC12A3P55017 1021 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 PEX3P56589 373 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ATP13A4Q4VNC1 1196 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 ASPRV1Q53RT3 343 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 HIPK4Q8NE63 616 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 CYTH2Q99418 400 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 PARVGQ9HBI0 331 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 FAM198AQ9UFP1 575 aa15.69■□□□□ 0.1
HOXC11-202ENST00000546378 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 A6NNZ2 444 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 F5H6K3 240 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 RAD23BP54727 409 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 ITIH3Q06033 890 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 KLRC3Q07444 240 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 TUBB8Q3ZCM7 444 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 RINT1Q6NUQ1 792 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 C6orf89Q6UWU4 347 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 ZNF564Q8TBZ8 553 aaPredicted RBP15.68■□□□□ 0.1
HOXC11-202ENST00000546378 SAE1Q9UBE0 346 aaPredicted RBP15.68■□□□□ 0.1
HOXC11-202ENST00000546378 TRPC6Q9Y210 931 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 PFASO15067 1338 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 KIAA0391O15091 583 aaKnown RBP15.68■□□□□ 0.1
HOXC11-202ENST00000546378 SLC8A1P32418 973 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 ITGA8P53708 1063 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 NPEPPSP55786 919 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 NOP14P78316 857 aaKnown RBP15.68■□□□□ 0.1
HOXC11-202ENST00000546378 DGKZQ13574 1117 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 CCDC33Q8N5R6 958 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 FBF1Q8TES7 1133 aa15.68■□□□□ 0.1
HOXC11-202ENST00000546378 OSBPL1AQ9BXW6 950 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms