RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 TUBGCP4Q9UGJ1 667 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 RTCBQ9Y3I0 505 aaKnown RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 TRIM17Q9Y577 477 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 VWDEQ8N2E2 1590 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 NUDT17P0C025 328 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 HSPA6P17066 643 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 HOXD12P35452 270 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 IKQ13123 557 aaPredicted RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 HIC1Q14526 733 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 SGMS1Q86VZ5 419 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 GCNAQ96QF7 691 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 KLF6Q99612 283 aaPredicted RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 PRPF18Q99633 342 aaKnown RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 DHX36Q9H2U1 1008 aaKnown RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 TMEM247A6NEH6 219 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 DLATP10515 647 aaKnown RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 RPL21P46778 160 aaKnown RBP11.01□□□□□ -0.65
SOD2-216ENST00000546260 SCARF1Q14162 830 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 LVRNQ6Q4G3 990 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 PYDC1Q8WXC3 89 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 TRIM9Q9C026 710 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 HDAC9Q9UKV0 1011 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 CHKBQ9Y259 395 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 PALLDQ8WX93 1383 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 JCADQ9P266 1359 aa11.01□□□□□ -0.65
SOD2-216ENST00000546260 PHF2O75151 1096 aa11□□□□□ -0.65
SOD2-216ENST00000546260 OR52Z1P0C646 297 aa11□□□□□ -0.65
SOD2-216ENST00000546260 ANPEPP15144 967 aa11□□□□□ -0.65
SOD2-216ENST00000546260 ARL1P40616 181 aaPredicted RBP11□□□□□ -0.65
SOD2-216ENST00000546260 CD151P48509 253 aa11□□□□□ -0.65
SOD2-216ENST00000546260 TRAPPC10P48553 1259 aa11□□□□□ -0.65
SOD2-216ENST00000546260 NEK2P51955 445 aa11□□□□□ -0.65
SOD2-216ENST00000546260 GALCP54803 685 aa11□□□□□ -0.65
SOD2-216ENST00000546260 PPP1R14BQ96C90 147 aa11□□□□□ -0.65
SOD2-216ENST00000546260 PRKAG3Q9UGI9 489 aa11□□□□□ -0.65
SOD2-216ENST00000546260 USP20Q9Y2K6 914 aa11□□□□□ -0.65
SOD2-216ENST00000546260 HBS1LQ9Y450 684 aaKnown RBP11□□□□□ -0.65
SOD2-216ENST00000546260 POTEFA5A3E0 1075 aa11□□□□□ -0.65
SOD2-216ENST00000546260 LRRN2O75325 713 aa11□□□□□ -0.65
SOD2-216ENST00000546260 NR2F2P24468 414 aa11□□□□□ -0.65
SOD2-216ENST00000546260 ALDH18A1P54886 795 aaKnown RBP11□□□□□ -0.65
SOD2-216ENST00000546260 KRT17Q04695 432 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CTTNQ14247 550 aaKnown RBP11□□□□□ -0.65
SOD2-216ENST00000546260 PDK3Q15120 406 aa11□□□□□ -0.65
SOD2-216ENST00000546260 ESCO1Q5FWF5 840 aa11□□□□□ -0.65
SOD2-216ENST00000546260 MARCOQ9UEW3 520 aaPredicted RBP11□□□□□ -0.65
SOD2-216ENST00000546260 NCAPD2Q15021 1401 aa11□□□□□ -0.65
SOD2-216ENST00000546260 WDR19Q8NEZ3 1342 aa11□□□□□ -0.65
SOD2-216ENST00000546260 RASA1P20936 1047 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CIITAP33076 1130 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CCNG1P51959 295 aa11□□□□□ -0.65
SOD2-216ENST00000546260 LRRC63Q05C16 580 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CFAP57Q96MR6 1250 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CNOT7Q9UIV1 285 aaKnown RBP11□□□□□ -0.65
SOD2-216ENST00000546260 DTNAQ9Y4J8 743 aa11□□□□□ -0.65
SOD2-216ENST00000546260 SYNGAP1Q96PV0 1343 aa11□□□□□ -0.65
SOD2-216ENST00000546260 PLEKHG1Q9ULL1 1385 aa11□□□□□ -0.65
SOD2-216ENST00000546260 PLS1Q14651 629 aa11□□□□□ -0.65
SOD2-216ENST00000546260 LPIN1Q14693 890 aa11□□□□□ -0.65
SOD2-216ENST00000546260 ARL6IP4Q66PJ3 421 aaKnown RBP11□□□□□ -0.65
SOD2-216ENST00000546260 RNF207Q6ZRF8 634 aa11□□□□□ -0.65
SOD2-216ENST00000546260 PALB2Q86YC2 1186 aa11□□□□□ -0.65
SOD2-216ENST00000546260 OR6Y1Q8NGX8 325 aa11□□□□□ -0.65
SOD2-216ENST00000546260 SLC35G2Q8TBE7 412 aa11□□□□□ -0.65
SOD2-216ENST00000546260 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
SOD2-216ENST00000546260 OSBPL8Q9BZF1 889 aa11□□□□□ -0.65
SOD2-216ENST00000546260 SHCBP1LQ9BZQ2 653 aa11□□□□□ -0.65
SOD2-216ENST00000546260 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
SOD2-216ENST00000546260 OSGEPQ9NPF4 335 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CNGB3Q9NQW8 809 aa11□□□□□ -0.65
SOD2-216ENST00000546260 STX18Q9P2W9 335 aaKnown RBP11□□□□□ -0.65
SOD2-216ENST00000546260 NAALADL1Q9UQQ1 740 aa11□□□□□ -0.65
SOD2-216ENST00000546260 CD163L1Q9NR16 1453 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 CABP4P57796 275 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 GALNTL6Q49A17 601 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 LPCAT2Q7L5N7 544 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 KRT27Q7Z3Y8 459 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 CTAGE3PQ8IX95 158 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 BHMT2Q9H2M3 363 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 EBF3Q9H4W6 596 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 TRNAU1APQ9NX07 287 aaKnown RBP10.99□□□□□ -0.65
SOD2-216ENST00000546260 PTTG2Q9NZH5 202 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 POTEIP0CG38 1075 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 ADD2P35612 726 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 RPL5P46777 297 aaKnown RBP10.99□□□□□ -0.65
SOD2-216ENST00000546260 CHN2P52757 468 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 PTENP60484 403 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 OASLQ15646 514 aaKnown RBP10.99□□□□□ -0.65
SOD2-216ENST00000546260 TXNRD1Q16881 649 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 TRIM16LQ309B1 348 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 FAM47AQ5JRC9 791 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 DQX1Q8TE96 717 aaKnown RBP10.99□□□□□ -0.65
SOD2-216ENST00000546260 GDPD5Q8WTR4 605 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 LARP4BQ92615 738 aaKnown RBP10.99□□□□□ -0.65
SOD2-216ENST00000546260 TSPAN18Q96SJ8 248 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 HAUS8Q9BT25 410 aa10.99□□□□□ -0.65
SOD2-216ENST00000546260 TSSK1BQ9BXA7 367 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms