RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 DYDC2Q96IM9 177 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 MTRQ99707 1265 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 TM6SF1Q9BZW5 370 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 NT5C3AQ9H0P0 336 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 CSRNP2Q9H175 543 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.56
CPSF7-225ENST00000545934 PLEKHA4Q9H4M7 779 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 ZSWIM4Q9H7M6 989 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 ZDHHC7Q9NXF8 308 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 DLGAP2Q9P1A6 1054 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 FNIP2Q9P278 1114 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 GIT1Q9Y2X7 761 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 HES2Q9Y543 173 aa18.58■□□□□ 0.56
CPSF7-225ENST00000545934 CCDC194A0A1B0GVG4 234 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 ANHXE9PGG2 379 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 TGM5O43548 720 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 SLITRK3O94933 977 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 MXD4Q14582 209 aaPredicted RBP18.57■□□□□ 0.56
CPSF7-225ENST00000545934 XKR9Q5GH70 373 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 PHLDB3Q6NSJ2 640 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 POTEDQ86YR6 584 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 CPB2Q96IY4 423 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 LARP6Q9BRS8 491 aaKnown RBP18.57■□□□□ 0.56
CPSF7-225ENST00000545934 COLEC11Q9BWP8 271 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 NFKBIZQ9BYH8 718 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 GPR62Q9BZJ7 368 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 SEMA4AQ9H3S1 761 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.57■□□□□ 0.56
CPSF7-225ENST00000545934 CYP46A1Q9Y6A2 500 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 COL4A3Q01955 1670 aa18.57■□□□□ 0.56
CPSF7-225ENST00000545934 STK36Q9NRP7 1315 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 CACNA1AO00555 2505 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 CCNT1O60563 726 aaKnown RBP18.56■□□□□ 0.56
CPSF7-225ENST00000545934 LYPLA2O95372 231 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 SPATA31D3P0C874 917 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 MYBP10242 640 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 LAMP2P13473 410 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 ARF4P18085 180 aaPredicted RBP18.56■□□□□ 0.56
CPSF7-225ENST00000545934 HTR4Q13639 388 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 CAPSQ13938 189 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 FUT10Q6P4F1 479 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 CPLX2Q6PUV4 134 aaKnown RBP18.56■□□□□ 0.56
CPSF7-225ENST00000545934 SPATA31D4Q6ZUB0 917 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 PALB2Q86YC2 1186 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 B3GALT6Q96L58 329 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 NAP1L4Q99733 375 aaKnown RBP18.56■□□□□ 0.56
CPSF7-225ENST00000545934 PRKD2Q9BZL6 878 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 NXF3Q9H4D5 531 aaKnown RBP18.56■□□□□ 0.56
CPSF7-225ENST00000545934 SLC2A4RGQ9NR83 387 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.56■□□□□ 0.568e-9■■■■■ 27.8
CPSF7-225ENST00000545934 CA14Q9ULX7 337 aa18.56■□□□□ 0.56
CPSF7-225ENST00000545934 CACNA1IQ9P0X4 2223 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 WDR87Q6ZQQ6 2873 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 ARL2P36404 184 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 STK3Q13188 491 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 CTTNQ14247 550 aaKnown RBP18.55■□□□□ 0.56
CPSF7-225ENST00000545934 USP41Q3LFD5 358 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 EARS2Q5JPH6 523 aaKnown RBP18.55■□□□□ 0.56
CPSF7-225ENST00000545934 NCAPH2Q6IBW4 605 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 OXER1Q8TDS5 423 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 GPR152Q8TDT2 470 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 ASAP3Q8TDY4 903 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 TBC1D17Q9HA65 648 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 GJB4Q9NTQ9 266 aa18.55■□□□□ 0.56
CPSF7-225ENST00000545934 FRYLO94915 3013 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 INO80B-WBP1J3KQ70 363 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 NR1I2O75469 434 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 CYP4A11Q02928 519 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 SCRN1Q12765 414 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 TFDP1Q14186 410 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 PIK3AP1Q6ZUJ8 805 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 SLFN12Q8IYM2 578 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 HSD17B14Q9BPX1 270 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 ADAM28Q9UKQ2 775 aa18.54■□□□□ 0.56
CPSF7-225ENST00000545934 A0A1B0GUA9 196 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 B4GALT5O43286 388 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 ZMYND10O75800 440 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 DGAT1O75907 488 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 LMNAP02545 664 aaKnown RBP18.53■□□□□ 0.56
CPSF7-225ENST00000545934 GLRA2P23416 452 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 AKAP5P24588 427 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 CREMQ03060 361 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 NCBP1Q09161 790 aaKnown RBP18.53■□□□□ 0.56
CPSF7-225ENST00000545934 GRIK3Q13003 919 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 SLC27A1Q6PCB7 646 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 HACE1Q8IYU2 909 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 APOL6Q9BWW8 343 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 PIDD1Q9HB75 910 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 ARHGEF3Q9NR81 526 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 ANKEF1Q9NU02 776 aa18.53■□□□□ 0.56
CPSF7-225ENST00000545934 ZFP37Q9Y6Q3 630 aaPredicted RBP18.53■□□□□ 0.56
CPSF7-225ENST00000545934 FAM205CA6NFA0 338 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 STK25O00506 426 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 CDKL5O76039 1030 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 RPL17P18621 184 aaKnown RBP18.52■□□□□ 0.56
CPSF7-225ENST00000545934 RTP2Q5QGT7 225 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 GET4Q7L5D6 327 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-225ENST00000545934 TPH2Q8IWU9 490 aa18.52■□□□□ 0.56
CPSF7-225ENST00000545934 RIN2Q8WYP3 895 aaPredicted RBP18.52■□□□□ 0.56
CPSF7-225ENST00000545934 TNFRSF25Q93038 417 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms