RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 SMARCE1Q969G3 411 aa13.03□□□□□ -0.32
LTBR-214ENST00000545445 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
LTBR-214ENST00000545445 C11orf84Q9BUA3 381 aaPredicted RBP13.03□□□□□ -0.32
LTBR-214ENST00000545445 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
LTBR-214ENST00000545445 ST6GALNAC4Q9H4F1 302 aa13.03□□□□□ -0.32
LTBR-214ENST00000545445 KMT5AQ9NQR1 393 aa13.03□□□□□ -0.32
LTBR-214ENST00000545445 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
LTBR-214ENST00000545445 A0A087WZ62 844 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 KLRC4O43908 158 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 RHOBTB3O94955 611 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 LINC00271P0C7V0 271 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 NDUFV1P49821 464 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 NCKAP1LP55160 1127 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 CACNB1Q02641 598 aaPredicted RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 EHHADHQ08426 723 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 TMEM62Q0P6H9 643 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 COASYQ13057 564 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 PNOCQ13519 176 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 CCDC183Q5T5S1 534 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 NT5DC1Q5TFE4 455 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 SFR1Q86XK3 245 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 FBXL6Q8N531 539 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 BSNDQ8WZ55 320 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 HVCN1Q96D96 273 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 PRRX2Q99811 253 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 FDXACB1Q9BRP7 624 aaPredicted RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 LMAN2LQ9H0V9 348 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 MRPL44Q9H9J2 332 aaKnown RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 IFT122Q9HBG6 1241 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
LTBR-214ENST00000545445 KIAA1468Q9P260 1216 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 GINS2Q9Y248 185 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 PCDHB13Q9Y5F0 798 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
LTBR-214ENST00000545445 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 ZDBF2Q9HCK1 2354 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 C5orf67F2Z3F1 127 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 K7ERI5 159 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 GPR182O15218 404 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 KIF20AO95235 890 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 SFPQP23246 707 aaKnown RBP eCLIP13.01□□□□□ -0.33
LTBR-214ENST00000545445 CASP1P29466 404 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 BMPR1AP36894 532 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 SARSP49591 514 aaKnown RBP13.01□□□□□ -0.33
LTBR-214ENST00000545445 ZXDAP98168 799 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 NCBP1Q09161 790 aaKnown RBP13.01□□□□□ -0.33
LTBR-214ENST00000545445 CAMK4Q16566 473 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 MAPK6Q16659 721 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 FAM187BQ17R55 369 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 FBXO47Q5MNV8 452 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 PRIMPOLQ96LW4 560 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 OSMRQ99650 979 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 POLD4Q9HCU8 107 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 PRMT7Q9NVM4 692 aaPredicted RBP13.01□□□□□ -0.33
LTBR-214ENST00000545445 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 EVPLQ92817 2033 aa13.01□□□□□ -0.33
LTBR-214ENST00000545445 NLRC5Q86WI3 1866 aa13□□□□□ -0.33
LTBR-214ENST00000545445 INO80B-WBP1J3KQ70 363 aa13□□□□□ -0.33
LTBR-214ENST00000545445 K7ENM7 598 aa13□□□□□ -0.33
LTBR-214ENST00000545445 EIF3DO15371 548 aaKnown RBP eCLIP13□□□□□ -0.33
LTBR-214ENST00000545445 SLC16A4O15374 487 aa13□□□□□ -0.33
LTBR-214ENST00000545445 RPS6KA5O75582 802 aa13□□□□□ -0.33
LTBR-214ENST00000545445 LETM1O95202 739 aaPredicted RBP13□□□□□ -0.33
LTBR-214ENST00000545445 RB1P06400 928 aa13□□□□□ -0.33
LTBR-214ENST00000545445 AXLP30530 894 aa13□□□□□ -0.33
LTBR-214ENST00000545445 GTF2BQ00403 316 aa13□□□□□ -0.33
LTBR-214ENST00000545445 STRN3Q13033 797 aa13□□□□□ -0.33
LTBR-214ENST00000545445 ADAM15Q13444 863 aa13□□□□□ -0.33
LTBR-214ENST00000545445 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
LTBR-214ENST00000545445 HAUS6Q7Z4H7 955 aa13□□□□□ -0.33
LTBR-214ENST00000545445 ATOH1Q92858 354 aaPredicted RBP13□□□□□ -0.33
LTBR-214ENST00000545445 APBB2Q92870 758 aa13□□□□□ -0.33
LTBR-214ENST00000545445 MSLNLQ96KJ4 702 aa13□□□□□ -0.33
LTBR-214ENST00000545445 FIZ1Q96SL8 496 aa13□□□□□ -0.33
LTBR-214ENST00000545445 CDHR5Q9HBB8 845 aa13□□□□□ -0.33
LTBR-214ENST00000545445 MYO15AQ9UKN7 3530 aa13□□□□□ -0.33
LTBR-214ENST00000545445 UBE4BO95155 1302 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 LOC730098B7Z3J9 87 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 ERLIN2O94905 339 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 GCNT3O95395 438 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 PPP1R2P41236 205 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 MBTD1Q05BQ5 628 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 PAK2Q13177 524 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 CAMK1Q14012 370 aa12.99□□□□□ -0.33
LTBR-214ENST00000545445 LPIN1Q14693 890 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms