RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 NXF1Q9UBU9 619 aaKnown RBP7.85□□□□□ -1.15
LDHA-223ENST00000545215 HCN2Q9UL51 889 aa7.85□□□□□ -1.15
LDHA-223ENST00000545215 PAXBP1Q9Y5B6 917 aa7.85□□□□□ -1.15
LDHA-223ENST00000545215 PCDHGC4Q9Y5F7 938 aa7.85□□□□□ -1.15
LDHA-223ENST00000545215 SHISA7A6NL88 538 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 HAS3O00219 553 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 CAND2O75155 1236 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 CD72P21854 359 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 RDXP35241 583 aaKnown RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 SOX18P35713 384 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 RAP1GAPP47736 663 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 OAZ1P54368 228 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 TNP2Q05952 138 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 GABPAQ06546 454 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 PDE4BQ07343 736 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 HDAC1Q13547 482 aaPredicted RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 PPP2R5BQ15173 497 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 CEP85Q6P2H3 762 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 RAB44Q7Z6P3 723 aaPredicted RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 CLEC10AQ8IUN9 316 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 THNSL1Q8IYQ7 743 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 MRPL43Q8N983 215 aaKnown RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 DEFB124Q8NES8 71 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 EXOC6Q8TAG9 804 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 SSH3Q8TE77 659 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 MRPS27Q92552 414 aaKnown RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 ALG1Q9BT22 464 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 OSBPL2Q9H1P3 480 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 RWDD1Q9H446 243 aaPredicted RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 ACAD9Q9H845 621 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 SLC38A10Q9HBR0 1119 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 VPS45Q9NRW7 570 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 TLR7Q9NYK1 1049 aaKnown RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 IL17BQ9UHF5 180 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 PUF60Q9UHX1 559 aaKnown RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 AKAP2Q9Y2D5 859 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 URB1O60287 2271 aaKnown RBP7.84□□□□□ -1.15
LDHA-223ENST00000545215 MYH1P12882 1939 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 ACACAQ13085 2346 aa7.84□□□□□ -1.15
LDHA-223ENST00000545215 TLDC2A0PJX2 215 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 FAM187AA6NFU0 413 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 CHURC1-FNTBB4DL54 471 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 ANHXE9PGG2 379 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 MAP3K6O95382 1288 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 CASTP20810 708 aaKnown RBP7.83□□□□□ -1.16
LDHA-223ENST00000545215 GBP2P32456 591 aaPredicted RBP7.83□□□□□ -1.16
LDHA-223ENST00000545215 EIF4A3P38919 411 aaKnown RBP7.83□□□□□ -1.16
LDHA-223ENST00000545215 ABCG1P45844 678 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 FNTBP49356 437 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 GPC5P78333 572 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 ICA1Q05084 483 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 ADCY1Q08828 1119 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 TFCP2Q12800 502 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 GORABQ5T7V8 394 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 DTHD1Q6ZMT9 781 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 CEP68Q76N32 757 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 ADGRA1Q86SQ6 560 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 LONP2Q86WA8 852 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 ERC1Q8IUD2 1116 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 EAF1Q96JC9 268 aaPredicted RBP7.83□□□□□ -1.16
LDHA-223ENST00000545215 RHOVQ96L33 236 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 NEUROD6Q96NK8 337 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 OSMRQ99650 979 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 ZSWIM4Q9H7M6 989 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 HOMER2Q9NSB8 354 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 TMA7Q9Y2S6 64 aaKnown RBP7.83□□□□□ -1.16
LDHA-223ENST00000545215 CTDP1Q9Y5B0 961 aaPredicted RBP7.83□□□□□ -1.16
LDHA-223ENST00000545215 PCDHGA5Q9Y5G8 931 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 PTPRQQ9UMZ3 2332 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 DOPEY2Q9Y3R5 2298 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 NAV1Q8NEY1 1877 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 APC2O95996 2303 aa7.83□□□□□ -1.16
LDHA-223ENST00000545215 C2orf71A6NGG8 1288 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 MINDY4BA8MYZ0 360 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 KHNYNO15037 678 aaKnown RBP7.82□□□□□ -1.16
LDHA-223ENST00000545215 RAB11FIP3O75154 756 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 PSAPP07602 524 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 MAPTP10636 758 aaKnown RBP7.82□□□□□ -1.16
LDHA-223ENST00000545215 ACPPP15309 386 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 NFKB1P19838 968 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 CCR3P51677 355 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 HYAL2Q12891 473 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 G3BP1Q13283 466 aaKnown RBP eCLIP7.82□□□□□ -1.166e-16■■■■□ 25.5
LDHA-223ENST00000545215 KIAA0753Q2KHM9 967 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 TCEAL6Q6IPX3 200 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 NAA16Q6N069 864 aaPredicted RBP7.82□□□□□ -1.16
LDHA-223ENST00000545215 CCNI2Q6ZMN8 369 aaPredicted RBP7.82□□□□□ -1.16
LDHA-223ENST00000545215 CEP120Q8N960 986 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 PHC3Q8NDX5 983 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 SCFD2Q8WU76 684 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 NANOS1Q8WY41 292 aaKnown RBP7.82□□□□□ -1.16
LDHA-223ENST00000545215 TCEAL3Q969E4 200 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 KATNAL1Q9BW62 490 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 USP26Q9BXU7 913 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 ZFYVE1Q9HBF4 777 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 NDFIP2Q9NV92 336 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 HMG20BQ9P0W2 317 aa7.82□□□□□ -1.16
LDHA-223ENST00000545215 NOP58Q9Y2X3 529 aaKnown RBP7.82□□□□□ -1.16
LDHA-223ENST00000545215 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms