RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 NME8Q8N427 588 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 PARD3BQ8TEW8 1205 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 LSM14BQ9BX40 385 aaKnown RBP33.11■■■□□ 2.89
CCM2-219ENST00000544363 GCOM2Q9BZD3 368 aaPredicted RBP33.11■■■□□ 2.89
CCM2-219ENST00000544363 TNFSF13BQ9Y275 285 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 HTTP42858 3142 aa33.11■■■□□ 2.89
CCM2-219ENST00000544363 ESPNB1AK53 854 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CABYRO75952 493 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 KRT9P35527 623 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 TMEM132AQ24JP5 1023 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 TAF2Q6P1X5 1199 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 MPZL3Q6UWV2 235 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CRELD2Q6UXH1 353 aaPredicted RBP33.1■■■□□ 2.89
CCM2-219ENST00000544363 USP37Q86T82 979 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 SH3TC2Q8TF17 1288 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CENPFP49454 3210 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CNTNAP2Q9UHC6 1331 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 ACOT2P49753 483 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CBWD6Q4V339 395 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CBWD3Q5JTY5 395 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 CBWD5Q5RIA9 395 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 GDF6Q6KF10 455 aaPredicted RBP33.1■■■□□ 2.89
CCM2-219ENST00000544363 ZBTB33Q86T24 672 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 ZNF710Q8N1W2 664 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 PYCARDQ9ULZ3 195 aa33.1■■■□□ 2.89
CCM2-219ENST00000544363 EPHB6O15197 1021 aa33.09■■■□□ 2.89
CCM2-219ENST00000544363 MSNP26038 577 aaKnown RBP33.09■■■□□ 2.89
CCM2-219ENST00000544363 NOLC1Q14978 699 aaKnown RBP eCLIP33.09■■■□□ 2.89
CCM2-219ENST00000544363 FAM47CQ5HY64 1035 aa33.09■■■□□ 2.89
CCM2-219ENST00000544363 TSEN34Q9BSV6 310 aaKnown RBP33.09■■■□□ 2.89
CCM2-219ENST00000544363 EDEM3Q9BZQ6 932 aa33.09■■■□□ 2.89
CCM2-219ENST00000544363 ABHD10Q9NUJ1 306 aa33.09■■■□□ 2.89
CCM2-219ENST00000544363 AGPAT5Q9NUQ2 364 aa33.09■■■□□ 2.89
CCM2-219ENST00000544363 STX10O60499 249 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 N4BP1O75113 896 aaKnown RBP33.08■■■□□ 2.89
CCM2-219ENST00000544363 HARSP12081 509 aaKnown RBP33.08■■■□□ 2.89
CCM2-219ENST00000544363 ACLYP53396 1101 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 PPP3CAQ08209 521 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 CCDC127Q96BQ5 260 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 CDHR5Q9HBB8 845 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 PLCB1Q9NQ66 1216 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 GINS2Q9Y248 185 aa33.08■■■□□ 2.89
CCM2-219ENST00000544363 MOXD2PA6NHM9 499 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 LRRIQ3A6PVS8 624 aaPredicted RBP33.07■■■□□ 2.88
CCM2-219ENST00000544363 OGTO15294 1046 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 P4HA2O15460 535 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 NOL4O94818 638 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 SLC9A1P19634 815 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 PON1P27169 355 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 ZBED6P86452 979 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 MYL7Q01449 175 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 EEF1DP3Q658K8 133 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 TMEM139Q8IV31 216 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 BAG1Q99933 345 aaPredicted RBP33.07■■■□□ 2.88
CCM2-219ENST00000544363 XRN2Q9H0D6 950 aaKnown RBP eCLIP33.07■■■□□ 2.88
CCM2-219ENST00000544363 GCNT4Q9P109 453 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 GRIN2DO15399 1336 aa33.07■■■□□ 2.88
CCM2-219ENST00000544363 FAM189A1O60320 539 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 ERLIN2O94905 339 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 PSMD6Q15008 389 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 ZNF568Q3ZCX4 644 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 ZBTB41Q5SVQ8 909 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 DNAJC5GQ8N7S2 189 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 ZNF397Q8NF99 534 aaPredicted RBP33.06■■■□□ 2.88
CCM2-219ENST00000544363 OR8K1Q8NGG5 319 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 OSMRQ99650 979 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 PMM2O15305 246 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 TSPAN1O60635 241 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 DARSP14868 501 aaKnown RBP33.06■■■□□ 2.88
CCM2-219ENST00000544363 ARF4P18085 180 aaPredicted RBP33.06■■■□□ 2.88
CCM2-219ENST00000544363 GCLMP48507 274 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 DPY19L2P1Q6NXN4 242 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 DNAJC7Q99615 494 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 RBAKQ9NYW8 714 aaPredicted RBP33.06■■■□□ 2.88
CCM2-219ENST00000544363 CEP72Q9P209 647 aa33.06■■■□□ 2.88
CCM2-219ENST00000544363 GTF2H1P32780 548 aa33.05■■■□□ 2.88
CCM2-219ENST00000544363 PCBP1Q15365 356 aaKnown RBP eCLIP33.05■■■□□ 2.88
CCM2-219ENST00000544363 VTI1AQ96AJ9 217 aa33.05■■■□□ 2.88
CCM2-219ENST00000544363 ITGA7Q13683 1181 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 ARRDC4Q8NCT1 418 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 CPB2Q96IY4 423 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 NAA15Q9BXJ9 866 aaKnown RBP33.04■■■□□ 2.88
CCM2-219ENST00000544363 TMEM117Q9H0C3 514 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 CDT1Q9H211 546 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 GANQ9H2C0 597 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 PDZD7Q9H5P4 517 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 FRMPD3Q5JV73 1810 aa33.04■■■□□ 2.88
CCM2-219ENST00000544363 DLATP10515 647 aaKnown RBP33.03■■■□□ 2.88
CCM2-219ENST00000544363 FECHP22830 423 aa33.03■■■□□ 2.88
CCM2-219ENST00000544363 EIF4BP23588 611 aaKnown RBP33.03■■■□□ 2.88
CCM2-219ENST00000544363 MXI1P50539 228 aa33.03■■■□□ 2.88
CCM2-219ENST00000544363 CETN1Q12798 172 aa33.03■■■□□ 2.88
CCM2-219ENST00000544363 SEZ6Q53EL9 994 aa33.03■■■□□ 2.88
CCM2-219ENST00000544363 SERINC5Q86VE9 423 aa33.03■■■□□ 2.88
CCM2-219ENST00000544363 CDR2LQ86X02 465 aaPredicted RBP33.03■■■□□ 2.88
CCM2-219ENST00000544363 KIAA1524Q8TCG1 905 aa33.03■■■□□ 2.88
CCM2-219ENST00000544363 POP1Q99575 1024 aaKnown RBP33.03■■■□□ 2.88
CCM2-219ENST00000544363 ACTN1P12814 892 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 FGFR4P22455 802 aa33.02■■■□□ 2.88
CCM2-219ENST00000544363 CRYBB1P53674 252 aaPredicted RBP33.02■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms