RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
CHFR-223ENST00000544268 IGSF9BQ9UPX0 1349 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 CCL15-CCL14A0A0B4J2E2 113 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 BTBD19C9JJ37 291 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 ITGBL1O95965 494 aaPredicted RBP16.17■□□□□ 0.18
CHFR-223ENST00000544268 GTF2A2P52657 109 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 EPHB4P54760 987 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 JAM2P57087 298 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 DLG4P78352 724 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 CCL15Q16663 113 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 BMT2Q1RMZ1 405 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 C6orf89Q6UWU4 347 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 FAM186BQ8IYM0 893 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
CHFR-223ENST00000544268 BRI3BPQ8WY22 251 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 GPRASP2Q96D09 838 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 LXNQ9BS40 222 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 PCIF1Q9H4Z3 704 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 TAS2R14Q9NYV8 317 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 PDHXO00330 501 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 ITGA4P13612 1032 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 SLC8A1P32418 973 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 SLC8A3P57103 927 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 ITIH3Q06033 890 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 NNTQ13423 1086 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 PTGISQ16647 500 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 CYB5D1Q6P9G0 228 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 DAW1Q8N136 415 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 LRRC57Q8N9N7 239 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 DNERQ8NFT8 737 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 CCDC114Q96M63 670 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 CCT8L2Q96SF2 557 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 PLCB1Q9NQ66 1216 aa16.17■□□□□ 0.18
CHFR-223ENST00000544268 EVI5O60447 810 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 PPP1R37O75864 691 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 SLC25A27O95847 323 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ABCB4P21439 1286 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ATP1A2P50993 1020 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 IFT88Q13099 833 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ODR4Q5SWX8 454 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 NLRX1Q86UT6 975 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 FAM228AQ86W67 206 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 FUKQ8N0W3 1084 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 CAVIN3Q969G5 261 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ZIM3Q96PE6 472 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 IWS1Q96ST2 819 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 PARVGQ9HBI0 331 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 SOWAHBA6NEL2 793 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 CEP104O60308 925 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ECM2O94769 699 aaPredicted RBP16.16■□□□□ 0.18
CHFR-223ENST00000544268 CCNE2O96020 404 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
CHFR-223ENST00000544268 ERVK-9P63128 1117 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ARHGAP44Q17R89 818 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 SPRYD7Q5W111 196 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 NLRP14Q86W24 1093 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 MYCBPAPQ8TBZ2 947 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 RNPC3Q96LT9 517 aaKnown RBP16.16■□□□□ 0.18
CHFR-223ENST00000544268 GPR88Q9GZN0 384 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 OLFML3Q9NRN5 406 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 PNMA3Q9UL41 463 aa16.16■□□□□ 0.18
CHFR-223ENST00000544268 FAM107AO95990 144 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 COPB2P35606 906 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 FAM178BQ8IXR5 827 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 KCTD17Q8N5Z5 321 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 METTL13Q8N6R0 699 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 USP38Q8NB14 1042 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 ARMC2Q8NEN0 867 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 TPCN2Q8NHX9 752 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 CCDC43Q96MW1 224 aaKnown RBP16.15■□□□□ 0.18
CHFR-223ENST00000544268 AGPAT3Q9NRZ7 376 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.15■□□□□ 0.18
CHFR-223ENST00000544268 KIF4AO95239 1232 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 PGK2P07205 417 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
CHFR-223ENST00000544268 KCNA2P16389 499 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 MUTP22033 750 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 IFFO1Q0D2I5 559 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 RPS6KA1Q15418 735 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 STXBP2Q15833 593 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 WDR78Q5VTH9 848 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 CHADLQ6NUI6 762 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 CCDC121Q6ZUS5 278 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 ADAT2Q7Z6V5 191 aaKnown RBP16.15■□□□□ 0.18
CHFR-223ENST00000544268 MAB21L3Q8N8X9 362 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 NEK9Q8TD19 979 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 NACC1Q96RE7 527 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 DDX47Q9H0S4 455 aaKnown RBP16.15■□□□□ 0.18
CHFR-223ENST00000544268 ACP6Q9NPH0 428 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 GDF3Q9NR23 364 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 NR2E1Q9Y466 385 aa16.15■□□□□ 0.18
CHFR-223ENST00000544268 DOCK5Q9H7D0 1870 aa16.14■□□□□ 0.17
CHFR-223ENST00000544268 HIP1RO75146 1068 aa16.14■□□□□ 0.17
CHFR-223ENST00000544268 STAM2O75886 525 aa16.14■□□□□ 0.17
CHFR-223ENST00000544268 P4HBP07237 508 aaKnown RBP16.14■□□□□ 0.17
CHFR-223ENST00000544268 FMO5P49326 533 aa16.14■□□□□ 0.17
CHFR-223ENST00000544268 CCNHP51946 323 aaPredicted RBP16.14■□□□□ 0.17
CHFR-223ENST00000544268 GUCY1A3Q02108 690 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms