RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CCNE2O96020 404 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 POLR2FP61218 127 aaKnown RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 ZNF699Q32M78 642 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 SPOUT1Q5T280 376 aaKnown RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 PPM1KQ8N3J5 372 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 LBHD1Q9BQE6 289 aaPredicted RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 INTS2Q9H0H0 1204 aaKnown RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 CYP3A43Q9HB55 503 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 FAM207AQ9NSI2 230 aaPredicted RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 FOXN1O15353 648 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 DHX15O43143 795 aaKnown RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 HUS1O60921 280 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 SMPD1P17405 629 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 ARL2P36404 184 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 MAGEA1P43355 309 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 PTENP60484 403 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 PDXDC1Q6P996 788 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 NTPCRQ9BSD7 190 aaKnown RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 ATP9AO75110 1047 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 FMO5P49326 533 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 SPIRE1Q08AE8 756 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 NFX1Q12986 1120 aaKnown RBP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 TAF12Q16514 161 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 CDKAL1Q5VV42 579 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 UBL4BQ8N7F7 174 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 SCFD1Q8WVM8 642 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 TNIP3Q96KP6 325 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRIM59-208ENST00000543469 ITGA11Q9UKX5 1188 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 STRIP2Q9ULQ0 834 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 PCDHB4Q9Y5E5 795 aa8.61□□□□□ -1.03
TRIM59-208ENST00000543469 CDK5RAP2Q96SN8 1893 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 NPHP3-ACAD11A0A0J9YXS1 232 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 SART1O43290 800 aaKnown RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 TAP1Q03518 808 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 PRKCZQ05513 592 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 PTGISQ16647 500 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 HSP90AA4PQ58FG1 418 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 THNSL1Q8IYQ7 743 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 RNF208Q9H0X6 261 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 MRPL47Q9HD33 250 aaKnown RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 ADAMTSL1Q8N6G6 1762 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 KLRC4O43908 158 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 ERLIN1O75477 346 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 INHAP05111 366 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 H2AFZP0C0S5 128 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 COL6A1P12109 1028 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 PTGS1P23219 599 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CST5P28325 142 aaPredicted RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 PSMD6Q15008 389 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CCDC62Q6P9F0 684 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 H2AFVQ71UI9 128 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 STK33Q9BYT3 514 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CELF4Q9BZC1 486 aaKnown RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CAPN11Q9UMQ6 739 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 SSX2IPQ9Y2D8 614 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 ATAD5Q96QE3 1844 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CTAGE9A4FU28 777 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 MFAP3LO75121 409 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 PIGRP01833 764 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 ZNF286BP0CG31 522 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CD19P15391 556 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 THPOP40225 353 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 VEGFBP49765 207 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 TSPY1Q01534 308 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 MAPRE1Q15691 268 aaKnown RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 FAM187BQ17R55 369 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 BRSK2Q8IWQ3 736 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 CEP112Q8N8E3 955 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 OXCT2Q9BYC2 517 aaPredicted RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 IGKV6D-21A0A0A0MT36 114 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
TRIM59-208ENST00000543469 DSTYKQ6XUX3 929 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 TRIM58Q8NG06 486 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 COLEC11Q9BWP8 271 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 SBF1O95248 1867 aa8.6□□□□□ -1.03
TRIM59-208ENST00000543469 SSU72P8A0A1W2PR75 194 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 SPDYE4A6NLX3 237 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 AOC2O75106 756 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 TAL1P17542 331 aaPredicted RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 NSFP46459 744 aaKnown RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 ANO5Q75V66 913 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 KIF12Q96FN5 646 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 RPGRIP1Q96KN7 1286 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 MMS19Q96T76 1030 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 F2P00734 622 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 CALB1P05937 261 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 GLRA2P23416 452 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 PSMC6P62333 389 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 CDK17Q00537 523 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 CYP24A1Q07973 514 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 NR1I3Q14994 352 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 FBXO46Q6PJ61 603 aaPredicted RBP8.59□□□□□ -1.03
TRIM59-208ENST00000543469 NECAB2Q7Z6G3 386 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 LRRC71Q8N4P6 559 aa8.59□□□□□ -1.03
TRIM59-208ENST00000543469 TMEM161BQ8NDZ6 487 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms