RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 RPGRIP1Q96KN7 1286 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 FAM107BQ9H098 131 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 C5orf60A6NFR6 353 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 KRIT1O00522 736 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 OAS1P00973 400 aaKnown RBP11.45□□□□□ -0.58
CALU-206ENST00000542996 GM2AP17900 193 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 GTF2BQ00403 316 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 RPS6KA1Q15418 735 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 CCDC60Q8IWA6 550 aaPredicted RBP11.45□□□□□ -0.58
CALU-206ENST00000542996 TMEM192Q8IY95 271 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 PARD3BQ8TEW8 1205 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 C1orf54Q8WWF1 131 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 PARVGQ9HBI0 331 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 KLHL11Q9NVR0 708 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 HSPBP1Q9NZL4 362 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 GTF3C4Q9UKN8 822 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 NME7Q9Y5B8 376 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 ERLIN1O75477 346 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
CALU-206ENST00000542996 PGM5Q15124 567 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 HSF5Q4G112 596 aaPredicted RBP11.45□□□□□ -0.58
CALU-206ENST00000542996 FAM219BQ5XKK7 198 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 TRNP1Q6NT89 227 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 EHBP1Q8NDI1 1231 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 TMEM174Q8WUU8 243 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 SHC3Q92529 594 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 AGPAT1Q99943 283 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 ZNF577Q9BSK1 485 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 RASSF4Q9H2L5 321 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 ABCF3Q9NUQ8 709 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 PTPN22Q9Y2R2 807 aa11.45□□□□□ -0.58
CALU-206ENST00000542996 WDFY4Q6ZS81 3184 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 AUHQ13825 339 aaKnown RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 PLEKHG4Q58EX7 1191 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 CCDC13Q8IYE1 715 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 OR5B17Q8NGF7 314 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 CPA5Q8WXQ8 436 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 DDX27Q96GQ7 796 aaKnown RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 PRR11Q96HE9 360 aaPredicted RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 FHDC1Q9C0D6 1143 aaPredicted RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 KDM3AQ9Y4C1 1321 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 COL2A1P02458 1487 aaPredicted RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 NPM3O75607 178 aaKnown RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 FOXN2P32314 431 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 NPTX2P47972 431 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 EN1Q05925 392 aaPredicted RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 CXCL9Q07325 125 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 ACCSLQ4AC99 568 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 SLC9A9Q8IVB4 645 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 TRIM56Q9BRZ2 755 aaKnown RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.44□□□□□ -0.58
CALU-206ENST00000542996 ARHGAP28Q9P2N2 729 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 PNMA3Q9UL41 463 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 FREM2Q5SZK8 3169 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 CCDC66A2RUB6 948 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 ZBTB42B2RXF5 422 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 CLDN3O15551 220 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 APBA3O96018 575 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 TMEM253P0C7T8 217 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 GHRHRQ02643 423 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 CKAP4Q07065 602 aaKnown RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 LRRC14Q15048 493 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
CALU-206ENST00000542996 ERMARDQ5T6L9 678 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 SV2AQ7L0J3 742 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 FBXL18Q96ME1 805 aa11.44□□□□□ -0.58
CALU-206ENST00000542996 A0A0A6YYK5 440 aaPredicted RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 SPDYE3A6NKU9 549 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 USO1O60763 962 aaKnown RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 TNFSF9P41273 254 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 NLRP11P59045 1033 aaKnown RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 SLFN12Q8IYM2 578 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 CCDC17Q96LX7 622 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 ERP44Q9BS26 406 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 KANSL3Q9P2N6 904 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 CES2O00748 559 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 ABLIM1O14639 778 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 SLC16A3O15427 465 aaKnown RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 PAEPP09466 180 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 KCNA2P16389 499 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 CDC25CP30307 473 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 NCKAP1LP55160 1127 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 PEX3P56589 373 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 MSS51Q4VC12 460 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 HP1BP3Q5SSJ5 553 aaPredicted RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 GBP6Q6ZN66 633 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 RMDN2Q96LZ7 410 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 FGD4Q96M96 766 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 PGLYRP2Q96PD5 576 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 ZNF214Q9UL59 606 aaPredicted RBP11.43□□□□□ -0.58
CALU-206ENST00000542996 DOCK3Q8IZD9 2030 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 CYP11B1P15538 503 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 MMP13P45452 471 aa11.43□□□□□ -0.58
CALU-206ENST00000542996 ADCY1Q08828 1119 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms