RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 TDGQ13569 410 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 AMHR2Q16671 573 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 TMEM105Q8N8V8 129 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 FEZF2Q8TBJ5 459 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 ASAP3Q8TDY4 903 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 HDAC7Q8WUI4 952 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 GTF3C6Q969F1 213 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 CCDC43Q96MW1 224 aaKnown RBP13.17□□□□□ -0.3
PTPN6-219ENST00000542848 TRIM6Q9C030 488 aaPredicted RBP13.17□□□□□ -0.3
PTPN6-219ENST00000542848 MFSD1Q9H3U5 465 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 MAN1C1Q9NR34 630 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 CHST7Q9NS84 486 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 IGSF9Q9P2J2 1179 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 HES2Q9Y543 173 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 MYH11P35749 1972 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 ZMYM2Q9UBW7 1377 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 MYH15Q9Y2K3 1946 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 CITO14578 2027 aa13.17□□□□□ -0.3
PTPN6-219ENST00000542848 CCDC195A0A1B0GUA6 201 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 TEX28O15482 410 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 GFRA3O60609 400 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 PAPLNO95428 1278 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 GLUD1P00367 558 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 GLRA2P23416 452 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 SCNN1GP51170 649 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 ME3Q16798 604 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 SLC27A1Q6PCB7 646 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 NECAB1Q8N987 351 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 GSTCDQ8NEC7 633 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 STAMQ92783 540 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 ZFP42Q96MM3 310 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 KCNK12Q9HB15 430 aa13.16□□□□□ -0.3
PTPN6-219ENST00000542848 WDR6Q9NNW5 1121 aaKnown RBP13.16□□□□□ -0.3
PTPN6-219ENST00000542848 NEMFO60524 1076 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 TRIM29Q14134 588 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 USP41Q3LFD5 358 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 DIS3L2Q8IYB7 885 aaKnown RBP13.15□□□□□ -0.3
PTPN6-219ENST00000542848 NSUN7Q8NE18 718 aaKnown RBP13.15□□□□□ -0.3
PTPN6-219ENST00000542848 PIGOQ8TEQ8 1089 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 PRIMPOLQ96LW4 560 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 NXF3Q9H4D5 531 aaKnown RBP13.15□□□□□ -0.3
PTPN6-219ENST00000542848 PLEKHA4Q9H4M7 779 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTPN6-219ENST00000542848 FNIP2Q9P278 1114 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 DUSP12Q9UNI6 340 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 FANCMQ8IYD8 2048 aa13.15□□□□□ -0.3
PTPN6-219ENST00000542848 NOTCH4Q99466 2003 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 B4GALT5O43286 388 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 LARGE1O95461 756 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 NPTXRO95502 500 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 SPATA31C1P0DKV0 1188 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 AKAP5P24588 427 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 NBL1P41271 181 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 CREMQ03060 361 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 GRIK3Q13003 919 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 FUT10Q6P4F1 479 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 MCPH1Q8NEM0 835 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 NXPE3Q969Y0 559 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 NACC1Q96RE7 527 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 GPR62Q9BZJ7 368 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 POLR3FQ9H1D9 316 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-219ENST00000542848 TUFT1Q9NNX1 390 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 PRMT7Q9NVM4 692 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-219ENST00000542848 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-219ENST00000542848 ADAM28Q9UKQ2 775 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 DMDP11532 3685 aa13.14□□□□□ -0.31
PTPN6-219ENST00000542848 A0A087WWV3 80 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 F8W810 466 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 WNT7AO00755 349 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 EIF5BO60841 1220 aaKnown RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 N4BP1O75113 896 aaKnown RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 TADA2AO75478 443 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 RFPL2O75678 378 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 NPR3P17342 541 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 AOC1P19801 751 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 GBP2P32456 591 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 LILRA6Q6PI73 481 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 PALB2Q86YC2 1186 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 SMG7Q92540 1137 aaKnown RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 ZNF707Q96C28 371 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-219ENST00000542848 NT5C3AQ9H0P0 336 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 TMEM60Q9H2L4 133 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 FZD8Q9H461 694 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 ZDHHC7Q9NXF8 308 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 EPS15L1Q9UBC2 864 aa13.13□□□□□ -0.31
PTPN6-219ENST00000542848 WNT16Q9UBV4 365 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms