RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 DENND3A2RUS2 1198 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 TMEM150BA6NC51 233 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ANKRD63C9JTQ0 380 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 H0YCG3 227 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 H0YGN5 161 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ATP2A1O14983 1001 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 TTI1O43156 1089 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ZC3H11AO75152 810 aaKnown RBP eCLIP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 STBD1O95210 358 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NR3C2P08235 984 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 KCNA2P16389 499 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CHRNB2P17787 502 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 GARTP22102 1010 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 SCP2P22307 547 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CNGA1P29973 690 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 GNGT1P63211 74 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 DGKZQ13574 1117 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 BAATQ14032 418 aaPredicted RBP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 UAP1Q16222 522 aaPredicted RBP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NSMFQ6X4W1 530 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ENOSF1Q7L5Y1 443 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NOP9Q86U38 636 aaKnown RBP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CBWD2Q8IUF1 395 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ZSWIM2Q8NEG5 633 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NT5C1BQ96P26 610 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NEUROG2Q9H2A3 272 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 PLEKHA4Q9H4M7 779 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 TMBIM4Q9HC24 238 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 KMT5AQ9NQR1 393 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CTTNBP2NLQ9P2B4 639 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 GTF3C4Q9UKN8 822 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ALG6Q9Y672 507 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NFS1Q9Y697 457 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 SIP14410 1827 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 GOLGA6L10A6NI86 522 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 DAPK3O43293 454 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 DGAT1O75907 488 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 EGFRP00533 1210 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CYP1A2P05177 515 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NR1D1P20393 614 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 GBP1P32455 592 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 DRG2P55039 364 aaKnown RBP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 FMO1Q01740 532 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CDR2Q01850 454 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 BIRC3Q13489 604 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 DALRD3Q5D0E6 543 aaKnown RBP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 RUFY4Q6ZNE9 571 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 TMC3Q7Z5M5 1100 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 FBXL13Q8NEE6 735 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 HELQQ8TDG4 1101 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 NSUN6Q8TEA1 469 aaKnown RBP7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ATP8B4Q8TF62 1192 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 ALG3Q92685 438 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 KAT5Q92993 513 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 CD101Q93033 1021 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 PCDHB18PQ96TA0 734 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 WNT8AQ9H1J5 351 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 PDLIM7Q9NR12 457 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 UVRAGQ9P2Y5 699 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 KCNG1Q9UIX4 513 aa7.05□□□□□ -1.28
PTPRO-208ENST00000542557 KIAA1217Q5T5P2 1943 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CCDC169A6NNP5 214 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 MYO1CO00159 1063 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF862O60290 1169 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PHF2O75151 1096 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SGPL1O95470 568 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PSAPP07602 524 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CTNNA2P26232 953 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CHRNA3P32297 505 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PDE6CP51160 858 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 DR1Q01658 176 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 GCNT1Q02742 428 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 MAP2K1Q02750 393 aaPredicted RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CYP24A1Q07973 514 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 BRDTQ58F21 947 aaPredicted RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 DNAJC21Q5F1R6 531 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 DUPD1Q68J44 220 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SLC39A4Q6P5W5 647 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 DDX42Q86XP3 938 aaKnown RBP eCLIP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 PPM1KQ8N3J5 372 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ARFGAP2Q8N6H7 521 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF280CQ8ND82 737 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 BSNDQ8WZ55 320 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SEMA4DQ92854 862 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 CEP170P1Q96L14 293 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RUNDC3BQ96NL0 473 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 SH2D3AQ9BRG2 576 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 TXLNGYQ9BZA5 131 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 FAM107BQ9H098 131 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RAB20Q9NX57 234 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 GABBR1Q9UBS5 961 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 HACL1Q9UJ83 578 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RASAL2Q9UJF2 1139 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZNF214Q9UL59 606 aaPredicted RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RIPK3Q9Y572 518 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 MYPNQ86TC9 1320 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
PTPRO-208ENST00000542557 ZNFX1Q9P2E3 1918 aaKnown RBP7.04□□□□□ -1.28
PTPRO-208ENST00000542557 RBM47A0AV96 593 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms