RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 MSTO1Q9BUK6 570 aa11.96□□□□□ -0.49
SCG3-202ENST00000542355 INO80BQ9C086 356 aaPredicted RBP11.96□□□□□ -0.49
SCG3-202ENST00000542355 INTS2Q9H0H0 1204 aaKnown RBP11.96□□□□□ -0.49
SCG3-202ENST00000542355 KIAA1586Q9HCI6 787 aa11.96□□□□□ -0.49
SCG3-202ENST00000542355 LZTFL1Q9NQ48 299 aa11.96□□□□□ -0.49
SCG3-202ENST00000542355 Q9Y3F1 56 aa11.96□□□□□ -0.49
SCG3-202ENST00000542355 COL1A2P08123 1366 aa11.96□□□□□ -0.49
SCG3-202ENST00000542355 DOCK3Q8IZD9 2030 aa11.96□□□□□ -0.49
SCG3-202ENST00000542355 A0A0B4J269 797 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 LRRIQ3A6PVS8 624 aaPredicted RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 N4BP1O75113 896 aaKnown RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 LRRN2O75325 713 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 CSDE1O75534 798 aaKnown RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 TRPA1O75762 1119 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 F2P00734 622 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 VTNP04004 478 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 MYL3P08590 195 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 AKR1A1P14550 325 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 CYLC1P35663 651 aaPredicted RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 PTENP60484 403 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 CAMK2BQ13554 666 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 ENOX2Q16206 610 aaKnown RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 MFSD14CQ5VZR4 134 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 ZPBP2Q6X784 338 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 LINC01465Q8N7H1 131 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 TMC2Q8TDI7 906 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 ACO2Q99798 780 aaKnown RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 TMEM117Q9H0C3 514 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 DEF6Q9H4E7 631 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 MINDY3Q9H8M7 445 aa11.96□□□□□ -0.5
SCG3-202ENST00000542355 AJAP1Q9UKB5 411 aaPredicted RBP11.96□□□□□ -0.5
SCG3-202ENST00000542355 A0A087WZ62 844 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 GOLGA6L9A6NEM1 432 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 P4HA2O15460 535 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 TOM1L1O75674 476 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 LDHAP00338 332 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 EIF4A3P38919 411 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 MXI1P50539 228 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 MAP2K1Q02750 393 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 KIF22Q14807 665 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 SLC9C1Q4G0N8 1177 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 SEZ6Q53EL9 994 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 ZBTB41Q5SVQ8 909 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 IQCEQ6IPM2 695 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 ZBTB33Q86T24 672 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 USP37Q86T82 979 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 LMO3Q8TAP4 145 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 SYN2Q92777 582 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 FDXACB1Q9BRP7 624 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 FZD8Q9H461 694 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 TOPORSQ9NS56 1045 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 AIPL1Q9NZN9 384 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 FBXL5Q9UKA1 691 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 USTQ9Y2C2 406 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 REXO2Q9Y3B8 237 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 RRN3P2A6NIE6 340 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 ACKR2O00590 384 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 IQCF3P0C7M6 154 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 MCCD1P59942 119 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 CYP27A1Q02318 531 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 MBTD1Q05BQ5 628 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 PRPF4BQ13523 1007 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 FSCN1Q16658 493 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 TDRD12Q587J7 1177 aaKnown RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 HGSNATQ68CP4 663 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 KRT39Q6A163 491 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 NFRKBQ6P4R8 1299 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 SYT10Q6XYQ8 523 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 KIAA0319LQ8IZA0 1049 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 ZNF784Q8NCA9 323 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 LMBR1Q8WVP7 490 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCG3-202ENST00000542355 RNF186Q9NXI6 227 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 APEX2Q9UBZ4 518 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 DNAJC12Q9UKB3 198 aa11.95□□□□□ -0.5
SCG3-202ENST00000542355 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.95□□□□□ -0.5
SCG3-202ENST00000542355 NRCAMQ92823 1304 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 EIF3CLB5ME19 914 aaKnown RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 B4GALT5O43286 388 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 AKR1B10O60218 316 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 DUSP11O75319 330 aaKnown RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 SERPING1P05155 500 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 PHKA2P46019 1235 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 KRT83P78385 493 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 TRIM32Q13049 653 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 ASIC2Q16515 512 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 EPC2Q52LR7 807 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 PHLDB3Q6NSJ2 640 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 CDR2LQ86X02 465 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 NLRP7Q8WX94 980 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 FNBP1Q96RU3 617 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 MAP7D2Q96T17 732 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms