RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 FOXO4P98177 505 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 ITKQ08881 620 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 ADAM9Q13443 819 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 PLEKHG6Q3KR16 790 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 GPR158Q5T848 1215 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 LRSAM1Q6UWE0 723 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 SYDE1Q6ZW31 735 aaPredicted RBP10.33□□□□□ -0.76
MRPS35-204ENST00000542199 DTX3Q8N9I9 347 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 THUMPD2Q9BTF0 503 aaKnown RBP10.33□□□□□ -0.76
MRPS35-204ENST00000542199 AMNQ9BXJ7 453 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 ASPSCR1Q9BZE9 553 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 PUS7LQ9H0K6 701 aaKnown RBP10.33□□□□□ -0.76
MRPS35-204ENST00000542199 NMRK2Q9NPI5 230 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 TYW1Q9NV66 732 aaKnown RBP10.33□□□□□ -0.76
MRPS35-204ENST00000542199 RNF181Q9P0P0 153 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 MAPK8IP3Q9UPT6 1336 aa10.33□□□□□ -0.76
MRPS35-204ENST00000542199 KDM1AO60341 852 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 ENO2P09104 434 aaPredicted RBP10.32□□□□□ -0.76
MRPS35-204ENST00000542199 PRELPP51888 382 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 EIF4A1P60842 406 aaKnown RBP10.32□□□□□ -0.76
MRPS35-204ENST00000542199 RTP5Q14D33 572 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 TMEFF1Q8IYR6 380 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 SMAD5Q99717 465 aaKnown RBP10.32□□□□□ -0.76
MRPS35-204ENST00000542199 ZDHHC5Q9C0B5 715 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 POFUT1Q9H488 388 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 MSRAQ9UJ68 235 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 TRHDEQ9UKU6 1024 aa10.32□□□□□ -0.76
MRPS35-204ENST00000542199 DLEC1Q9Y238 1755 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 UBA6A0AVT1 1052 aaPredicted RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 KLRG2A4D1S0 409 aaPredicted RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 NFIBO00712 420 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 TOMM70O94826 608 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 PLA2G1BP04054 148 aaKnown RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 SRGNP10124 158 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 GLRBP48167 497 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 ERVK-21P61565 698 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 DDX10Q13206 875 aaKnown RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 PDCD1Q15116 288 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 RASSF3Q86WH2 238 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 ZZZ3Q8IYH5 903 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 AHCYL2Q96HN2 611 aaKnown RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 INCENPQ9NQS7 918 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 C14orf119Q9NWQ9 140 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
MRPS35-204ENST00000542199 MYBBP1AQ9BQG0 1328 aaKnown RBP10.31□□□□□ -0.76
MRPS35-204ENST00000542199 ANKRD31Q8N7Z5 1873 aa10.3□□□□□ -0.76
MRPS35-204ENST00000542199 PRLP01236 227 aa10.3□□□□□ -0.76
MRPS35-204ENST00000542199 EXOSC10Q01780 885 aaKnown RBP10.3□□□□□ -0.76
MRPS35-204ENST00000542199 SMAD4Q13485 552 aaKnown RBP10.3□□□□□ -0.76
MRPS35-204ENST00000542199 SSPNQ14714 243 aa10.3□□□□□ -0.76
MRPS35-204ENST00000542199 HLFQ16534 295 aa10.3□□□□□ -0.76
MRPS35-204ENST00000542199 NBPF5PQ86XG9 351 aaPredicted RBP10.3□□□□□ -0.76
MRPS35-204ENST00000542199 IGDCC4Q8TDY8 1250 aa10.3□□□□□ -0.76
MRPS35-204ENST00000542199 ZNF622Q969S3 477 aaKnown RBP eCLIP10.3□□□□□ -0.76
MRPS35-204ENST00000542199 C11orf84Q9BUA3 381 aaPredicted RBP10.3□□□□□ -0.76
MRPS35-204ENST00000542199 DLL4Q9NR61 685 aa10.3□□□□□ -0.76
MRPS35-204ENST00000542199 ERVV-1B6SEH8 477 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 IL18BPO95998 194 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 KRT1P04264 644 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
MRPS35-204ENST00000542199 RGS3P49796 1198 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 RIPK4P57078 832 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 SLC6A3Q01959 620 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 ALDH6A1Q02252 535 aaKnown RBP10.29□□□□□ -0.76
MRPS35-204ENST00000542199 MYBPC3Q14896 1274 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 C7orf31Q8N865 590 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 MASTLQ96GX5 879 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 TMEM209Q96SK2 561 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
MRPS35-204ENST00000542199 BABAM1Q9NWV8 329 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 NIP7Q9Y221 180 aaKnown RBP eCLIP10.29□□□□□ -0.76
MRPS35-204ENST00000542199 KDM3BQ7LBC6 1761 aa10.29□□□□□ -0.76
MRPS35-204ENST00000542199 COL11A2P13942 1736 aaPredicted RBP10.28□□□□□ -0.76
MRPS35-204ENST00000542199 GABRDO14764 452 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 NPHP1O15259 732 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 GLDCP23378 1020 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 IARSP41252 1262 aaKnown RBP10.28□□□□□ -0.76
MRPS35-204ENST00000542199 ABCB5Q2M3G0 1257 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 TTC38Q5R3I4 469 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 SYDE2Q5VT97 1194 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 PRAMEF9Q5VWM5 478 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 CBARPQ8N350 705 aaPredicted RBP10.28□□□□□ -0.76
MRPS35-204ENST00000542199 ZBTB8AQ96BR9 441 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 SIGLEC10Q96LC7 697 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 TUBGCP5Q96RT8 1024 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 FOXB1Q99853 325 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 TACO1Q9BSH4 297 aaKnown RBP10.28□□□□□ -0.76
MRPS35-204ENST00000542199 MYL10Q9BUA6 226 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 IRF2BPLQ9H1B7 796 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 ARHGAP20Q9P2F6 1191 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 TSPYL4Q9UJ04 414 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 ZFP69BQ9UJL9 534 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 IRAK3Q9Y616 596 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 MAP3K15Q6ZN16 1313 aa10.28□□□□□ -0.76
MRPS35-204ENST00000542199 SBF1O95248 1867 aa10.27□□□□□ -0.76
MRPS35-204ENST00000542199 DLG5Q8TDM6 1919 aa10.27□□□□□ -0.76
MRPS35-204ENST00000542199 GLTPD2A6NH11 291 aa10.27□□□□□ -0.77
MRPS35-204ENST00000542199 K7ESF4 209 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms