RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 VCXQ9H320 206 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 KDM3AQ9Y4C1 1321 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 CCDC88AQ3V6T2 1871 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 PVALEFA0A1B0GWK0 134 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 A6NHS1 94 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 CYP11B2P19099 503 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 KCNH2Q12809 1159 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 KIAA1755Q5JYT7 1200 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 DNAJC9Q8WXX5 260 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 ZNF341Q9BYN7 854 aa17.92■□□□□ 0.46
PDCD2-208ENST00000541970 ANKRD33BA6NCL7 494 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 RBAK-RBAKDNI3L0D1 243 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 MRPS35P82673 323 aaKnown RBP17.91■□□□□ 0.46
PDCD2-208ENST00000541970 SLFN12Q8IYM2 578 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 ATP8B4Q8TF62 1192 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 ADAM33Q9BZ11 813 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 hCG_1984214I3L0E3 225 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 MEIS2O14770 477 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 POLR2MP0CAP2 368 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 KCNJ1P48048 391 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 CUL3Q13618 768 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 ZNF713Q8N859 430 aaPredicted RBP17.91■□□□□ 0.46
PDCD2-208ENST00000541970 DTX3LQ8TDB6 740 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 P2RX7Q99572 595 aaKnown RBP17.91■□□□□ 0.46
PDCD2-208ENST00000541970 CCPG1Q9ULG6 757 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 hCG_2014768A0A024R1R8 64 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 BRAFP15056 766 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
PDCD2-208ENST00000541970 CASP4P49662 377 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 FGD4Q96M96 766 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 AGBL1Q96MI9 1066 aa17.91■□□□□ 0.46
PDCD2-208ENST00000541970 EML1O00423 815 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 MSH4O15457 936 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
PDCD2-208ENST00000541970 RASIP1Q5U651 963 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 RFX8Q6ZV50 586 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 APBB1IPQ7Z5R6 666 aaPredicted RBP17.9■□□□□ 0.46
PDCD2-208ENST00000541970 EXOC3L1Q86VI1 746 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SRRM1Q8IYB3 904 aaKnown RBP17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SUPT20HQ8NEM7 779 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 DCAF4Q8WV16 495 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 PGM2Q96G03 612 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 EIF2AK1Q9BQI3 630 aaKnown RBP17.9■□□□□ 0.46
PDCD2-208ENST00000541970 ZNF577Q9BSK1 485 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 RUSC1Q9BVN2 902 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 RNPEPL1Q9HAU8 725 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 KCNMB3Q9NPA1 279 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 ARHGEF3Q9NR81 526 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SUGT1Q9Y2Z0 365 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 EPHB2P29323 1055 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 ODR4Q5SWX8 454 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 TEX9Q8N6V9 391 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 PITPNM3Q9BZ71 974 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 RXFP1Q9HBX9 757 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 NKIRAS1Q9NYS0 192 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 PPP1R9AQ9ULJ8 1098 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 YDJCA8MPS7 323 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 EDIL3O43854 480 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 LRRN2O75325 713 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 ALADP13716 330 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 ALDH3A1P30838 453 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SERPINB4P48594 390 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 TRIP13Q15645 432 aaPredicted RBP17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SYCE1Q8N0S2 351 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 TTLL6Q8N841 843 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 FLAD1Q8NFF5 587 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SCFD1Q8WVM8 642 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SPIRE2Q8WWL2 714 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 NYAP2Q9P242 653 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 SCOCQ9UIL1 159 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 USH1CQ9Y6N9 552 aa17.9■□□□□ 0.46
PDCD2-208ENST00000541970 NRAPQ86VF7 1730 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 TESPA1A2RU30 521 aaPredicted RBP17.89■□□□□ 0.45
PDCD2-208ENST00000541970 CALB2P22676 271 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 PTDSS1P48651 473 aaKnown RBP17.89■□□□□ 0.45
PDCD2-208ENST00000541970 ARHGAP22Q7Z5H3 698 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 GLYCTKQ8IVS8 523 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 NIM1KQ8IY84 436 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 EIF1ADQ8N9N8 165 aaKnown RBP17.89■□□□□ 0.45
PDCD2-208ENST00000541970 JDP2Q8WYK2 163 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 ARAP2Q8WZ64 1704 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 ARHGEF35A5YM69 484 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 TRIM49P0CI25 452 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 TRIM49CP0CI26 452 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 GALCP54803 685 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 AUHQ13825 339 aaKnown RBP17.89■□□□□ 0.45
PDCD2-208ENST00000541970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.89■□□□□ 0.451e-8■■□□□ 14
PDCD2-208ENST00000541970 LRRC57Q8N9N7 239 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 CTNNBL1Q8WYA6 563 aaPredicted RBP17.89■□□□□ 0.45
PDCD2-208ENST00000541970 ITFG2Q969R8 447 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 ELMO3Q96BJ8 720 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 GBP5Q96PP8 586 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 MYH1P12882 1939 aa17.89■□□□□ 0.45
PDCD2-208ENST00000541970 TMEM150BA6NC51 233 aa17.88■□□□□ 0.45
PDCD2-208ENST00000541970 SNHG28P0DPA3 235 aa17.88■□□□□ 0.45
PDCD2-208ENST00000541970 RPL21P46778 160 aaKnown RBP17.88■□□□□ 0.45
PDCD2-208ENST00000541970 EXOC3L4Q17RC7 722 aa17.88■□□□□ 0.45
PDCD2-208ENST00000541970 NT5DC3Q86UY8 548 aa17.88■□□□□ 0.45
PDCD2-208ENST00000541970 SIAH1Q8IUQ4 282 aa17.88■□□□□ 0.45
PDCD2-208ENST00000541970 FAM178BQ8IXR5 827 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms