RNA–Protein interactions for RNA: ENST00000541969.1

USP5-205, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 3

Gene USP5, Length 766 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-205ENST00000541969 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 USP28Q96RU2 1077 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 TCHPQ9BT92 498 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 ZHX3Q9H4I2 956 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 PDZD7Q9H5P4 517 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 SNTG2Q9NY99 539 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 KCND2Q9NZV8 630 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 PLXNA4Q9HCM2 1894 aa12.97□□□□□ -0.33
USP5-205ENST00000541969 TCF20Q9UGU0 1960 aaKnown RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 MUC3AQ02505 3323 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 GRXCR2A6NFK2 248 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 TTLL13PA6NNM8 815 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 FSCN2O14926 492 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 SLC16A4O15374 487 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 PLS3P13797 630 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 LTBRP36941 435 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 SLC12A3P55017 1021 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 GRIN1Q05586 938 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 DLX2Q07687 328 aaPredicted RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 GIT2Q14161 759 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 STK38Q15208 465 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 PTPAQ15257 358 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 DUSP6Q16828 381 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 DCAF4L1Q3SXM0 396 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 TMEM119Q4V9L6 283 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 LLGL2Q6P1M3 1020 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 GPBP1Q86WP2 473 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 MRPL43Q8N983 215 aaKnown RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 CHAMP1Q96JM3 812 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 ZNF396Q96N95 335 aaPredicted RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 COLEC11Q9BWP8 271 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 MRPL4Q9BYD3 311 aaKnown RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 CCDC113Q9H0I3 377 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 TMEM134Q9H6X4 195 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 MIOSQ9NXC5 875 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 LARSQ9P2J5 1176 aaKnown RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 STK39Q9UEW8 545 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 CD207Q9UJ71 328 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 GDAQ9Y2T3 454 aa12.96□□□□□ -0.33
USP5-205ENST00000541969 PRG3Q9Y2Y8 225 aaPredicted RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 SRPRBQ9Y5M8 271 aaKnown RBP12.96□□□□□ -0.33
USP5-205ENST00000541969 CHD7Q9P2D1 2997 aa12.96□□□□□ -0.34
USP5-205ENST00000541969 TCHHQ07283 1943 aa12.96□□□□□ -0.34
USP5-205ENST00000541969 NPHP3-ACAD11A0A0J9YXS1 232 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 H0YCG3 227 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 FAM13AO94988 1023 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 IL9P15248 144 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 PLCG1P19174 1290 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 SSTR3P32745 418 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.34
USP5-205ENST00000541969 NASPP49321 788 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 GRIK3Q13003 919 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 MCM6Q14566 821 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 COL19A1Q14993 1142 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 FOXD4L6Q3SYB3 417 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 NT5DC1Q5TFE4 455 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 FOXD4L3Q6VB84 417 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 TMEM173Q86WV6 379 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 DAW1Q8N136 415 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 MYCT1Q8N699 235 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 EPSTI1Q96J88 318 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 CLIC6Q96NY7 704 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 CCSER1Q9C0I3 900 aa12.95□□□□□ -0.34
USP5-205ENST00000541969 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
USP5-205ENST00000541969 C2orf71A6NGG8 1288 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 TBX10O75333 385 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 TADA2AO75478 443 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 THP07101 528 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 CTSAP10619 480 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 DNM1Q05193 864 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 SLC39A14Q15043 492 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 ZNF568Q3ZCX4 644 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 RRAGBQ5VZM2 374 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 EEF1DP3Q658K8 133 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 KIAA1841Q6NSI8 718 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 ZBTB33Q86T24 672 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 COLGALT2Q8IYK4 626 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 KRI1Q8N9T8 703 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 SPIRE2Q8WWL2 714 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 AUTS2Q8WXX7 1259 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 LARP4BQ92615 738 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 RAD54LQ92698 747 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 BICD1Q96G01 975 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 NTPCRQ9BSD7 190 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 CCDC94Q9BW85 323 aaPredicted RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 TARS2Q9BW92 718 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 EMILIN2Q9BXX0 1053 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 MRPL17Q9NRX2 175 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 TFIP11Q9UBB9 837 aaKnown RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 FBXO2Q9UK22 296 aaPredicted RBP12.94□□□□□ -0.34
USP5-205ENST00000541969 ODF2LQ9ULJ1 636 aa12.94□□□□□ -0.34
USP5-205ENST00000541969 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms