RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 NT5C3AQ9H0P0 336 aa13.65□□□□□ -0.22
SNHG1-216ENST00000541416 CSRNP2Q9H175 543 aa13.65□□□□□ -0.22
SNHG1-216ENST00000541416 SLC2A4RGQ9NR83 387 aa13.65□□□□□ -0.22
SNHG1-216ENST00000541416 CHST7Q9NS84 486 aa13.65□□□□□ -0.22
SNHG1-216ENST00000541416 VAV3Q9UKW4 847 aa13.65□□□□□ -0.22
SNHG1-216ENST00000541416 ZMYM2Q9UBW7 1377 aa13.65□□□□□ -0.22
SNHG1-216ENST00000541416 TDRD15B5MCY1 1934 aaKnown RBP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 GVINP1Q7Z2Y8 2422 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 M0R2N6 131 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 EML1O00423 815 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 TGM5O43548 720 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 CCNT1O60563 726 aaKnown RBP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 TSPAN1O60635 241 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 TADA2AO75478 443 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 CDKL5O76039 1030 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 SCNN1GP51170 649 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 PTENP60484 403 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 PUM1Q14671 1186 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 LIN9Q5TKA1 542 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 MTSS1LQ765P7 747 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 RUFY3Q7L099 469 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 FEZF2Q8TBJ5 459 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 RIN2Q8WYP3 895 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 ZNF707Q96C28 371 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 KCNMB3Q9NPA1 279 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 ADAM28Q9UKQ2 775 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 CYP46A1Q9Y6A2 500 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 R4GN57 208 aa13.64□□□□□ -0.23
SNHG1-216ENST00000541416 MTCL1Q9Y4B5 1905 aaKnown RBP13.64□□□□□ -0.23
SNHG1-216ENST00000541416 SF3B1O75533 1304 aaKnown RBP eCLIP13.64□□□□□ -0.238e-10■■■■■ 30
SNHG1-216ENST00000541416 ANHXE9PGG2 379 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 SLC37A4O43826 429 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 KINO60870 393 aaKnown RBP13.63□□□□□ -0.23
SNHG1-216ENST00000541416 EFEMP2O95967 443 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 DCNP07585 359 aaKnown RBP13.63□□□□□ -0.23
SNHG1-216ENST00000541416 SPATA31D3P0C874 917 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 MYBP10242 640 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 FSHRP23945 695 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 GRIK3Q13003 919 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 HTR4Q13639 388 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 NCAPH2Q6IBW4 605 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 FUT10Q6P4F1 479 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 SLC27A1Q6PCB7 646 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 SPATA31D4Q6ZUB0 917 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
SNHG1-216ENST00000541416 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 EIF2AQ9BY44 585 aaKnown RBP13.63□□□□□ -0.23
SNHG1-216ENST00000541416 BCO2Q9BYV7 579 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 NUMBLQ9Y6R0 609 aa13.63□□□□□ -0.23
SNHG1-216ENST00000541416 XYLBO75191 536 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 ZMYND10O75800 440 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 DGAT1O75907 488 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 HNRNPA1P09651 372 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNHG1-216ENST00000541416 SP9P0CG40 484 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 SDHBP21912 280 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 MAGEA9P43362 315 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 PFKPQ01813 784 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
SNHG1-216ENST00000541416 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
SNHG1-216ENST00000541416 PJA1Q8NG27 643 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 SECISBP2LQ93073 1101 aaKnown RBP13.62□□□□□ -0.23
SNHG1-216ENST00000541416 RMDN1Q96DB5 314 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 CPB2Q96IY4 423 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 NFKBIZQ9BYH8 718 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 HES2Q9Y543 173 aa13.62□□□□□ -0.23
SNHG1-216ENST00000541416 DOCK8Q8NF50 2099 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 STARD6P59095 220 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 CYP4A11Q02928 519 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 PRKCQQ04759 706 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 ELAVL2Q12926 359 aaKnown RBP13.61□□□□□ -0.23
SNHG1-216ENST00000541416 HSP90AA2PQ14568 343 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-216ENST00000541416 ZNF528Q3MIS6 628 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 PPM1LQ5SGD2 360 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 LILRA6Q6PI73 481 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 GLYCTKQ8IVS8 523 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 TPH2Q8IWU9 490 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 GPR161Q8N6U8 529 aaKnown RBP13.61□□□□□ -0.23
SNHG1-216ENST00000541416 DYDC2Q96IM9 177 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 GPR62Q9BZJ7 368 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
SNHG1-216ENST00000541416 RGL1Q9NZL6 768 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 WRAP73Q9P2S5 460 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-216ENST00000541416 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
SNHG1-216ENST00000541416 PARP2Q9UGN5 583 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 CDH7Q9ULB5 785 aa13.61□□□□□ -0.23
SNHG1-216ENST00000541416 CACNA1AO00555 2505 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 KANSL1LA0AUZ9 987 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 SPTLC1O15269 473 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 NCAM2O15394 837 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 EPB41L2O43491 1005 aaKnown RBP13.6□□□□□ -0.23
SNHG1-216ENST00000541416 LAMTOR5O43504 91 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 ARF4P18085 180 aaPredicted RBP13.6□□□□□ -0.23
SNHG1-216ENST00000541416 AKAP5P24588 427 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 HOXA9P31269 272 aa13.6□□□□□ -0.23
SNHG1-216ENST00000541416 MBTD1Q05BQ5 628 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms