RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CACNA1HO95180 2353 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 CCDC195A0A1B0GUA6 201 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 GFRA3O60609 400 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 GLUD1P00367 558 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 SPATA31D3P0C874 917 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 NUBP1P53384 320 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 C15orf39Q6ZRI6 1047 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 SPATA31D4Q6ZUB0 917 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 RABGGTAQ92696 567 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 B3GALT6Q96L58 329 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 KLK14Q9P0G3 267 aa26.63■■□□□ 1.85
LEMD3-203ENST00000541171 POTEMA6NI47 508 aa26.62■■□□□ 1.85
LEMD3-203ENST00000541171 NEFLP07196 543 aa26.62■■□□□ 1.85
LEMD3-203ENST00000541171 ASTLQ6HA08 431 aaPredicted RBP26.62■■□□□ 1.85
LEMD3-203ENST00000541171 PALB2Q86YC2 1186 aa26.62■■□□□ 1.85
LEMD3-203ENST00000541171 RNF168Q8IYW5 571 aaPredicted RBP26.62■■□□□ 1.85
LEMD3-203ENST00000541171 FLCNQ8NFG4 579 aa26.62■■□□□ 1.85
LEMD3-203ENST00000541171 MTMR9Q96QG7 549 aa26.62■■□□□ 1.85
LEMD3-203ENST00000541171 GPRC5CQ9NQ84 441 aa26.62■■□□□ 1.85
LEMD3-203ENST00000541171 LRRIQ4A6NIV6 560 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 EFEMP2O95967 443 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 DSG1Q02413 1049 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 TDGQ13569 410 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 SLC27A1Q6PCB7 646 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 ELMSAN1Q6PJG2 1045 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 GLYCTKQ8IVS8 523 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 CMASQ8NFW8 434 aaPredicted RBP26.61■■□□□ 1.85
LEMD3-203ENST00000541171 NFKBIZQ9BYH8 718 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 TMEM60Q9H2L4 133 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 KCNK12Q9HB15 430 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 RXFP1Q9HBX9 757 aa26.61■■□□□ 1.85
LEMD3-203ENST00000541171 ST18O60284 1047 aa26.6■■□□□ 1.85
LEMD3-203ENST00000541171 RFPL2O75678 378 aa26.6■■□□□ 1.85
LEMD3-203ENST00000541171 GBP2P32456 591 aaPredicted RBP26.6■■□□□ 1.85
LEMD3-203ENST00000541171 NEK4P51957 841 aa26.6■■□□□ 1.85
LEMD3-203ENST00000541171 GSTCDQ8NEC7 633 aa26.6■■□□□ 1.85
LEMD3-203ENST00000541171 GPR62Q9BZJ7 368 aa26.6■■□□□ 1.85
LEMD3-203ENST00000541171 DPP7Q9UHL4 492 aa26.6■■□□□ 1.85
LEMD3-203ENST00000541171 DENND4AQ7Z401 1863 aa26.59■■□□□ 1.85
LEMD3-203ENST00000541171 MCM7P33993 719 aa26.59■■□□□ 1.85
LEMD3-203ENST00000541171 FUT10Q6P4F1 479 aa26.59■■□□□ 1.85
LEMD3-203ENST00000541171 SMG7Q92540 1137 aaKnown RBP26.59■■□□□ 1.85
LEMD3-203ENST00000541171 CHST7Q9NS84 486 aa26.59■■□□□ 1.85
LEMD3-203ENST00000541171 CACNG4Q9UBN1 327 aa26.59■■□□□ 1.85
LEMD3-203ENST00000541171 FBXL21Q9UKT6 434 aa26.59■■□□□ 1.85
LEMD3-203ENST00000541171 ZFHX2Q9C0A1 2572 aaPredicted RBP26.58■■□□□ 1.85
LEMD3-203ENST00000541171 A0A1B0GUA9 196 aa26.58■■□□□ 1.85
LEMD3-203ENST00000541171 N4BP1O75113 896 aaKnown RBP26.58■■□□□ 1.85
LEMD3-203ENST00000541171 SPATA31C1P0DKV0 1188 aa26.58■■□□□ 1.85
LEMD3-203ENST00000541171 XRCC6P12956 609 aaKnown RBP eCLIP26.58■■□□□ 1.853e-6■■■□□ 16.1
LEMD3-203ENST00000541171 GUCY1B3Q02153 619 aa26.58■■□□□ 1.85
LEMD3-203ENST00000541171 USP41Q3LFD5 358 aa26.58■■□□□ 1.85
LEMD3-203ENST00000541171 RIN2Q8WYP3 895 aaPredicted RBP26.58■■□□□ 1.85
LEMD3-203ENST00000541171 WDR6Q9NNW5 1121 aaKnown RBP26.58■■□□□ 1.85
LEMD3-203ENST00000541171 C2orf16Q68DN1 1984 aa26.58■■□□□ 1.85
LEMD3-203ENST00000541171 MED24O75448 989 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 TADA2AO75478 443 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 RPL17P18621 184 aaKnown RBP26.57■■□□□ 1.84
LEMD3-203ENST00000541171 CLCN5P51795 746 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 GRIK3Q13003 919 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 TMEM132AQ24JP5 1023 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 CATSPER3Q86XQ3 398 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 RSAD2Q8WXG1 361 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 PIDD1Q9HB75 910 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 ADAM28Q9UKQ2 775 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 DUSP12Q9UNI6 340 aa26.57■■□□□ 1.84
LEMD3-203ENST00000541171 TDRD15B5MCY1 1934 aaKnown RBP26.57■■□□□ 1.84
LEMD3-203ENST00000541171 PLXNA3P51805 1871 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 TGM5O43548 720 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 NARSO43776 548 aaKnown RBP26.56■■□□□ 1.84
LEMD3-203ENST00000541171 CWF19L1Q69YN2 538 aaKnown RBP26.56■■□□□ 1.84
LEMD3-203ENST00000541171 ZBTB8OSQ8IWT0 167 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 STAMQ92783 540 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 TUFT1Q9NNX1 390 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 PRMT7Q9NVM4 692 aaPredicted RBP26.56■■□□□ 1.84
LEMD3-203ENST00000541171 IGSF9Q9P2J2 1179 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 CLUHO75153 1309 aa26.56■■□□□ 1.84
LEMD3-203ENST00000541171 PI15O43692 258 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 LIG1P18858 919 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 SAFBQ15424 915 aaKnown RBP eCLIP26.55■■□□□ 1.84
LEMD3-203ENST00000541171 CYP26C1Q6V0L0 522 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 SIX5Q8N196 739 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 MCPH1Q8NEM0 835 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 HASPINQ8TF76 798 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 ZNF707Q96C28 371 aaPredicted RBP26.55■■□□□ 1.84
LEMD3-203ENST00000541171 MYADMQ96S97 322 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 PAAF1Q9BRP4 392 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 PLEKHA4Q9H4M7 779 aa26.55■■□□□ 1.84
LEMD3-203ENST00000541171 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.55■■□□□ 1.84
LEMD3-203ENST00000541171 TTLL13PA6NNM8 815 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 NPR3P17342 541 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 ST3GAL1Q11201 340 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 HSP90AA2PQ14568 343 aaPredicted RBP26.54■■□□□ 1.84
LEMD3-203ENST00000541171 PRSS55Q6UWB4 352 aaPredicted RBP26.54■■□□□ 1.84
LEMD3-203ENST00000541171 PPP4R3CPQ6ZMV5 832 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 HDAC7Q8WUI4 952 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 PRIMPOLQ96LW4 560 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 NACC1Q96RE7 527 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 NT5C3AQ9H0P0 336 aa26.54■■□□□ 1.84
LEMD3-203ENST00000541171 USP20Q9Y2K6 914 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms