RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PIDD1Q9HB75 910 aa29.86■■■□□ 2.37
CHFR-218ENST00000540963 CCDC194A0A1B0GVG4 234 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 ANHXE9PGG2 379 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 TFDP1Q14186 410 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 USP41Q3LFD5 358 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 PRKD2Q9BZL6 878 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 ZSWIM6Q9HCJ5 1215 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 SLC2A4RGQ9NR83 387 aa29.85■■■□□ 2.37
CHFR-218ENST00000540963 EPB41L2O43491 1005 aaKnown RBP29.84■■■□□ 2.37
CHFR-218ENST00000540963 SCNN1GP51170 649 aa29.84■■■□□ 2.37
CHFR-218ENST00000540963 XKR9Q5GH70 373 aa29.84■■■□□ 2.37
CHFR-218ENST00000540963 LILRA6Q6PI73 481 aa29.84■■■□□ 2.37
CHFR-218ENST00000540963 ZC3H14Q6PJT7 736 aaKnown RBP29.84■■■□□ 2.37
CHFR-218ENST00000540963 KCNG4Q8TDN1 519 aa29.84■■■□□ 2.37
CHFR-218ENST00000540963 RNF39Q9H2S5 420 aa29.84■■■□□ 2.37
CHFR-218ENST00000540963 CA14Q9ULX7 337 aa29.84■■■□□ 2.37
CHFR-218ENST00000540963 DMXL1Q9Y485 3027 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 TGM5O43548 720 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 FUT10Q6P4F1 479 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 GPR152Q8TDT2 470 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 HAS1Q92839 578 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 ZFP42Q96MM3 310 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 PHF20Q9BVI0 1012 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 NFKBIZQ9BYH8 718 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 ARHGEF3Q9NR81 526 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 MIOSQ9NXC5 875 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 DLGAP2Q9P1A6 1054 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 SIT1Q9Y3P8 196 aa29.83■■■□□ 2.37
CHFR-218ENST00000540963 HTR4Q13639 388 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 PALB2Q86YC2 1186 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 SLFN12Q8IYM2 578 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 AIFM3Q96NN9 605 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 TRIM6Q9C030 488 aaPredicted RBP29.82■■■□□ 2.36
CHFR-218ENST00000540963 RGL1Q9NZL6 768 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 ADAM28Q9UKQ2 775 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 HES2Q9Y543 173 aa29.82■■■□□ 2.36
CHFR-218ENST00000540963 INO80B-WBP1J3KQ70 363 aa29.81■■■□□ 2.36
CHFR-218ENST00000540963 SPIRE1Q08AE8 756 aa29.81■■■□□ 2.36
CHFR-218ENST00000540963 GPR62Q9BZJ7 368 aa29.81■■■□□ 2.36
CHFR-218ENST00000540963 XPNPEP1Q9NQW7 623 aa29.81■■■□□ 2.36
CHFR-218ENST00000540963 BMP2KQ9NSY1 1161 aaPredicted RBP29.81■■■□□ 2.36
CHFR-218ENST00000540963 CYP46A1Q9Y6A2 500 aa29.81■■■□□ 2.36
CHFR-218ENST00000540963 MARCH6O60337 910 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 CCNT1O60563 726 aaKnown RBP29.8■■■□□ 2.36
CHFR-218ENST00000540963 ZMYND10O75800 440 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 SPATA31D3P0C874 917 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 XBP1P17861 261 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 MBTD1Q05BQ5 628 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 GRIK3Q13003 919 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 AMHR2Q16671 573 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 SPATA31D4Q6ZUB0 917 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 GSTCDQ8NEC7 633 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 BORCS6Q96GS4 357 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 DYDC2Q96IM9 177 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 CPB2Q96IY4 423 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 KCNJ14Q9UNX9 436 aa29.8■■■□□ 2.36
CHFR-218ENST00000540963 F8W810 466 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 LYPLA2O95372 231 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 BAG4O95429 457 aaKnown RBP29.79■■■□□ 2.36
CHFR-218ENST00000540963 ARF4P18085 180 aaPredicted RBP29.79■■■□□ 2.36
CHFR-218ENST00000540963 NCAPH2Q6IBW4 605 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 DCLRE1AQ6PJP8 1040 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 GET4Q7L5D6 327 aaPredicted RBP29.79■■■□□ 2.36
CHFR-218ENST00000540963 C1orf210Q8IVY1 113 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 SHDQ96IW2 340 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 TM6SF1Q9BZW5 370 aa29.79■■■□□ 2.36
CHFR-218ENST00000540963 DGAT1O75907 488 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 CDKL5O76039 1030 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 STARD6P59095 220 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 SLC27A1Q6PCB7 646 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 RIN2Q8WYP3 895 aaPredicted RBP29.78■■■□□ 2.36
CHFR-218ENST00000540963 NXF3Q9H4D5 531 aaKnown RBP29.78■■■□□ 2.36
CHFR-218ENST00000540963 ANKEF1Q9NU02 776 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 NUMBLQ9Y6R0 609 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 R4GN57 208 aa29.78■■■□□ 2.36
CHFR-218ENST00000540963 FRYLO94915 3013 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 SF3B1O75533 1304 aaKnown RBP eCLIP29.77■■■□□ 2.36
CHFR-218ENST00000540963 MIA3Q5JRA6 1907 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 MYH15Q9Y2K3 1946 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 OTOGLQ3ZCN5 2332 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 SLITRK3O94933 977 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 SP9P0CG40 484 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 MYBP10242 640 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 ARL2P36404 184 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 CAPSQ13938 189 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 CTTNQ14247 550 aaKnown RBP29.77■■■□□ 2.36
CHFR-218ENST00000540963 PJA1Q8NG27 643 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 APOL6Q9BWW8 343 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 CACNA1IQ9P0X4 2223 aa29.77■■■□□ 2.36
CHFR-218ENST00000540963 STK36Q9NRP7 1315 aa29.76■■■□□ 2.36
CHFR-218ENST00000540963 DOCK6Q96HP0 2047 aa29.76■■■□□ 2.36
CHFR-218ENST00000540963 A0A1B0GUA9 196 aa29.76■■■□□ 2.35
CHFR-218ENST00000540963 ZBTB39O15060 712 aa29.76■■■□□ 2.35
CHFR-218ENST00000540963 DCNP07585 359 aaKnown RBP29.76■■■□□ 2.35
CHFR-218ENST00000540963 HNRNPA1P09651 372 aaKnown RBP eCLIP29.76■■■□□ 2.35
CHFR-218ENST00000540963 CYP4A11Q02928 519 aa29.76■■■□□ 2.35
CHFR-218ENST00000540963 POTEDQ86YR6 584 aa29.76■■■□□ 2.35
CHFR-218ENST00000540963 TPH2Q8IWU9 490 aa29.76■■■□□ 2.35
CHFR-218ENST00000540963 B3GALT6Q96L58 329 aa29.76■■■□□ 2.35
CHFR-218ENST00000540963 TADA2AO75478 443 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms