RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 DENND3A2RUS2 1198 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 TRIM49BA6NDI0 452 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ESPNB1AK53 854 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 EIF3DO15371 548 aaKnown RBP eCLIP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ASAP2O43150 1006 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 CALUO43852 315 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ADAMTS4O75173 837 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 C22orf31O95567 290 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 F2P00734 622 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 SRGAP2CP0DJJ0 459 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 CAPN2P17655 700 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ABCD1P33897 745 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ARL2P36404 184 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 PTGIRP43119 386 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 CTSOP43234 321 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 CASP5P51878 434 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 MCCD1P59942 119 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 PURAQ00577 322 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 LRRC63Q05C16 580 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 STRN3Q13033 797 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ALCAMQ13740 583 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 TFDP1Q14186 410 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 MXD4Q14582 209 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 KNOP1Q1ED39 458 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 COBLL1Q53SF7 1204 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ANKRD40Q6AI12 368 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 NFRKBQ6P4R8 1299 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 MTHFD1LQ6UB35 978 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 RHPN2Q8IUC4 686 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 KSR1Q8IVT5 923 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 GPR161Q8N6U8 529 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 KLHDC9Q8NEP7 349 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ANKRD20A12PQ8NF67 263 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 DEPTORQ8TB45 409 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ZNF507Q8TCN5 953 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 PPP1R13LQ8WUF5 828 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 SCFD1Q8WVM8 642 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 BSNDQ8WZ55 320 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 KAT2BQ92831 832 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 ACCSQ96QU6 501 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 CEP89Q96ST8 783 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 MAP7D2Q96T17 732 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 NTPCRQ9BSD7 190 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 SRRTQ9BXP5 876 aaKnown RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 TRIM5Q9C035 493 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 FAM49AQ9H0Q0 323 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 SEMA6BQ9H3T3 888 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 TMEM206Q9H813 350 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 PDLIM7Q9NR12 457 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 MAGEC2Q9UBF1 373 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 AKT3Q9Y243 479 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 PCDHA2Q9Y5H9 948 aa7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 TNRC18O15417 2968 aaPredicted RBP7.29□□□□□ -1.24
CLTCL1-206ENST00000540896 UBE4BO95155 1302 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 KIAA0100Q14667 2235 aaKnown RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 BRCA2P51587 3418 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 IGKV6-21A0A0C4DH24 114 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 C17orf102A2RUQ5 167 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ZBTB42B2RXF5 422 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 KBTBD13C9JR72 458 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 K7ERI5 159 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ERVH48-1M5A8F1 160 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 HAS3O00219 553 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 DNM1LO00429 736 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 PDXKO00764 312 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 CABYRO75952 493 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 SERPINC1P01008 464 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ASGR1P07306 291 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 TPM2P07951 284 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 CYP2C9P11712 490 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 SCP2P22307 547 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 GLRA2P23416 452 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 RPL13P26373 211 aaKnown RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 CST5P28325 142 aaPredicted RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 MATR3P43243 847 aaKnown RBP eCLIP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 NAMPTP43490 491 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 CLCN3P51790 818 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 EFNA5P52803 228 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ACLYP53396 1101 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 PMS1P54277 932 aaKnown RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 NKX3-2P78367 333 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 GTF2BQ00403 316 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 CDC42EP1Q00587 391 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 LAMTOR4Q0VGL1 99 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 DRP2Q13474 957 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 NCAPHQ15003 741 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 CENPPQ6IPU0 288 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 EPM2AIP1Q7L775 607 aaPredicted RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 FAM114A1Q8IWE2 563 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ZBTB8OSQ8IWT0 167 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 VWA5B2Q8N398 1253 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 RNF149Q8NC42 400 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 GOLGA5Q8TBA6 731 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 RNF217Q8TC41 542 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ASAP3Q8TDY4 903 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 NOC3LQ8WTT2 800 aaKnown RBP7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 LMBR1Q8WVP7 490 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 HVCN1Q96D96 273 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 ZBTB10Q96DT7 871 aa7.28□□□□□ -1.24
CLTCL1-206ENST00000540896 BICD1Q96G01 975 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms