RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 BZW2Q9Y6E2 419 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 PABPN1LA6NDY0 278 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 LRRIQ4A6NIV6 560 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 ZSCAN9O15535 394 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 TPD52L2O43399 206 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 RARAP10276 462 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 RPL13P26373 211 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 IFNAR2P48551 515 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PDE6CP51160 858 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 ATP11AP98196 1134 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PTK2Q05397 1052 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 ARHGAP44Q17R89 818 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 ZCWPW2Q504Y3 356 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 ZC2HC1CQ53FD0 456 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 WDR44Q5JSH3 913 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 APOBEC3HQ6NTF7 200 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 ALKBH5Q6P6C2 394 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 ZNF571Q7Z3V5 609 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 GBP7Q8N8V2 638 aaPredicted RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 ATP8B4Q8TF62 1192 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 UCMAQ8WVF2 138 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 DDX12PQ92771 950 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 MRRFQ96E11 262 aaKnown RBP5.6□□□□□ -1.51
PROM1-220ENST00000540805 PNMA5Q96PV4 448 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 FERMT1Q9BQL6 677 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 TXLNGYQ9BZA5 131 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 KCNMB3Q9NPA1 279 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 AMFRQ9UKV5 643 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 BLOC1S6Q9UL45 172 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PCDHA12Q9UN75 941 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PCDHGA4Q9Y5G9 962 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 ATAD5Q96QE3 1844 aa5.6□□□□□ -1.51
PROM1-220ENST00000540805 PALM3A6NDB9 673 aaPredicted RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 SNX3O60493 162 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 FGGP02679 453 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 H2AFZP0C0S5 128 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 ZBTB48P10074 688 aaPredicted RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 ETS2P15036 469 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 ATP2A2P16615 1042 aaKnown RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 RFC5P40937 340 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 CYP2J2P51589 502 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 COASYQ13057 564 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 ORC2Q13416 577 aaPredicted RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 PPP2R5EQ16537 467 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 FAM26FQ5R3K3 315 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 C6orf118Q5T5N4 469 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 FAM102BQ5T8I3 360 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 FOXB2Q5VYV0 432 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 H2AFVQ71UI9 128 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 TAOK1Q7L7X3 1001 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 MIER3Q7Z3K6 550 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 DGKHQ86XP1 1220 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 TRIM59Q8IWR1 403 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 GLIS3Q8NEA6 775 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 DEPTORQ8TB45 409 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 PAIP2Q9BPZ3 127 aaKnown RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 ADAM7Q9H2U9 754 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 PABPC3Q9H361 631 aaKnown RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 PREBQ9HCU5 417 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 RASAL2Q9UJF2 1139 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 NAGPAQ9UK23 515 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 USTQ9Y2C2 406 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 SSX2IPQ9Y2D8 614 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 DAAM1Q9Y4D1 1078 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 USP15Q9Y4E8 981 aaPredicted RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 ZHX2Q9Y6X8 837 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 ATP8B3O60423 1300 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 FAM187AA6NFU0 413 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 H0Y3Z8 333 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 CETN3O15182 167 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 SUN1O94901 812 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 COPS2P61201 443 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 DR1Q01658 176 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 SPP2Q13103 211 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 BLMHQ13867 455 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 ZFPM1Q8IX07 1006 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 UHMK1Q8TAS1 419 aaKnown RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 TBCKQ8TEA7 893 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 TEKT4Q8WW24 435 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 COA7Q96BR5 231 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 RPS6KC1Q96S38 1066 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 DDX50Q9BQ39 737 aaKnown RBP5.59□□□□□ -1.51
PROM1-220ENST00000540805 PNMA3Q9UL41 463 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 STXBP5LQ9Y2K9 1186 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 IKBKGQ9Y6K9 419 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 CEP350Q5VT06 3117 aa5.59□□□□□ -1.51
PROM1-220ENST00000540805 A0A0A6YYK5 440 aaPredicted RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 INO80B-WBP1J3KQ70 363 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 GH2P01242 217 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 KRT16P08779 473 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 SNHG28P0DPA3 235 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 EIF2AK2P19525 551 aaKnown RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 MARSP56192 900 aaKnown RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 POU5F1Q01860 360 aaKnown RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 PABPC4Q13310 644 aaKnown RBP eCLIP5.59□□□□□ -1.52
PROM1-220ENST00000540805 ADAM9Q13443 819 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 TAF11Q15544 211 aa5.59□□□□□ -1.52
PROM1-220ENST00000540805 SHROOM1Q2M3G4 852 aaPredicted RBP5.59□□□□□ -1.52
PROM1-220ENST00000540805 ANKRD20A2Q5SQ80 823 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms