RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 EEF1DP3Q658K8 133 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 RNF168Q8IYW5 571 aaPredicted RBP16.02■□□□□ 0.16
MSRB3-209ENST00000540804 KREMEN2Q8NCW0 462 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 MCPH1Q8NEM0 835 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 ERMNQ8TAM6 284 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 ASIC4Q96FT7 647 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 GPR62Q9BZJ7 368 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 FZD8Q9H461 694 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 PDZD7Q9H5P4 517 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 MRPL17Q9NRX2 175 aaKnown RBP16.02■□□□□ 0.16
MSRB3-209ENST00000540804 DZANK1Q9NVP4 752 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 SNTG2Q9NY99 539 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 LRWD1Q9UFC0 647 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 KIAA1024Q9UPX6 916 aa16.02■□□□□ 0.16
MSRB3-209ENST00000540804 TEX28O15482 410 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 SPATA31D3P0C874 917 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 IGFBP6P24592 240 aaPredicted RBP16.01■□□□□ 0.15
MSRB3-209ENST00000540804 CDC25AP30304 524 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
MSRB3-209ENST00000540804 MTHFRP42898 656 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 PTGDRQ13258 359 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 KIAA0319Q5VV43 1072 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 KIAA1841Q6NSI8 718 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 SPATA31D4Q6ZUB0 917 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 ZBTB33Q86T24 672 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 GLYCTKQ8IVS8 523 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 ZBTB8OSQ8IWT0 167 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 HASPINQ8TF76 798 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 MFSD14AQ96MC6 490 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 RIPOR3Q96MK2 946 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 RPS6KC1Q96S38 1066 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 EMILIN2Q9BXX0 1053 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 PRMT7Q9NVM4 692 aaPredicted RBP16.01■□□□□ 0.15
MSRB3-209ENST00000540804 WDFY4Q6ZS81 3184 aa16.01■□□□□ 0.15
MSRB3-209ENST00000540804 CARNS1A5YM72 827 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 E9PMD0 336 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 PTGESO14684 152 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 BRD1O95696 1058 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 PRKCBP05771 671 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 URODP06132 367 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 RPL17P18621 184 aaKnown RBP16■□□□□ 0.15
MSRB3-209ENST00000540804 U2AF2P26368 475 aaKnown RBP eCLIP16■□□□□ 0.15
MSRB3-209ENST00000540804 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
MSRB3-209ENST00000540804 SIGLEC14Q08ET2 396 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
MSRB3-209ENST00000540804 TMEM132AQ24JP5 1023 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 ATAT1Q5SQI0 421 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 BMP8AQ7Z5Y6 402 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 PRSS33Q8NF86 280 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 DEPTORQ8TB45 409 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 NECTIN4Q96NY8 510 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 MAN1C1Q9NR34 630 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
MSRB3-209ENST00000540804 LIMD1Q9UGP4 676 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 NOL7Q9UMY1 257 aaKnown RBP16■□□□□ 0.15
MSRB3-209ENST00000540804 NR2E1Q9Y466 385 aa16■□□□□ 0.15
MSRB3-209ENST00000540804 CASTOR2A6NHX0 329 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 GLUD2P49448 558 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 VCPP55072 806 aaKnown RBP15.99■□□□□ 0.15
MSRB3-209ENST00000540804 NHLH1Q02575 133 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 PRPF4BQ13523 1007 aaKnown RBP15.99■□□□□ 0.15
MSRB3-209ENST00000540804 FAM187BQ17R55 369 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 FUT10Q6P4F1 479 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 KCNK18Q7Z418 384 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 GPR149Q86SP6 731 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 ALYREFQ86V81 257 aaKnown RBP15.99■□□□□ 0.15
MSRB3-209ENST00000540804 PPFIBP1Q86W92 1011 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 HACE1Q8IYU2 909 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 SNX29Q8TEQ0 813 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 PRIMPOLQ96LW4 560 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 COLEC11Q9BWP8 271 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 SFXN1Q9H9B4 322 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 TECTAO75443 2155 aa15.99■□□□□ 0.15
MSRB3-209ENST00000540804 RFPL2O75678 378 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 RECQL4O94761 1208 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 NAMPTP43490 491 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 DSG1Q02413 1049 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 GRIK3Q13003 919 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 MAPK6Q16659 721 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 NT5DC1Q5TFE4 455 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 HAUS3Q68CZ6 603 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 MCTP1Q6DN14 999 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 PRSS55Q6UWB4 352 aaPredicted RBP15.98■□□□□ 0.15
MSRB3-209ENST00000540804 IGSF22Q8N9C0 903 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 TDRD5Q8NAT2 981 aaKnown RBP15.98■□□□□ 0.15
MSRB3-209ENST00000540804 PHOX2BQ99453 314 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 RXFP1Q9HBX9 757 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 CHST7Q9NS84 486 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
MSRB3-209ENST00000540804 CCDC195A0A1B0GUA6 201 aa15.97■□□□□ 0.15
MSRB3-209ENST00000540804 ACKR2O00590 384 aa15.97■□□□□ 0.15
MSRB3-209ENST00000540804 N4BP3O15049 544 aa15.97■□□□□ 0.15
MSRB3-209ENST00000540804 NR1I2O75469 434 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms