RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CALML4Q96GE6 196 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 MFSD14AQ96MC6 490 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 TBC1D32Q96NH3 1257 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 BHMT2Q9H2M3 363 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 FZD8Q9H461 694 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 DDX19AQ9NUU7 478 aaKnown RBP11.46□□□□□ -0.57
CDCA3-208ENST00000540683 BARX2Q9UMQ3 279 aaPredicted RBP11.46□□□□□ -0.57
CDCA3-208ENST00000540683 KIAA1024Q9UPX6 916 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 HCFC2Q9Y5Z7 792 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 K7ERI5 159 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 LINC01565O15544 149 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 POMCP01189 267 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 SOD2P04179 222 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 KLRC2P26717 231 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 GTF2F1P35269 517 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDCA3-208ENST00000540683 MLH1P40692 756 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 OR1G1P47890 313 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 ATP2C1P98194 919 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-208ENST00000540683 DLX2Q07687 328 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-208ENST00000540683 STRN3Q13033 797 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 HERC4Q5GLZ8 1057 aaPredicted RBP11.45□□□□□ -0.58
CDCA3-208ENST00000540683 UBXN11Q5T124 520 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 MAEAQ7L5Y9 396 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 CABP7Q86V35 215 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 HDAC7Q8WUI4 952 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 SUSD6Q92537 303 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 GAD1Q99259 594 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 PRRX2Q99811 253 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 ADAM7Q9H2U9 754 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 TMEM134Q9H6X4 195 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 SFXN1Q9H9B4 322 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.45□□□□□ -0.58
CDCA3-208ENST00000540683 PARP2Q9UGN5 583 aa11.45□□□□□ -0.58
CDCA3-208ENST00000540683 SF3B1O75533 1304 aaKnown RBP eCLIP11.44□□□□□ -0.589e-6■■■■■ 68.9
CDCA3-208ENST00000540683 CCDC169A6NNP5 214 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 HIDE1A8MVS5 230 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 NT5C1B-RDH14C9J2C7 533 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 NRP1O14786 923 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 TRAPPC3O43617 180 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 CLASP2O75122 1294 aaKnown RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 NPTXRO95502 500 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 GLP2RO95838 553 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 THP07101 528 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 PBX3P40426 434 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 UBA7P41226 1012 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 SLC11A1P49279 550 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 GLUD2P49448 558 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 TUSC3Q13454 348 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 KCNC3Q14003 757 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 AMHR2Q16671 573 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 KYAT1Q16773 422 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 USP41Q3LFD5 358 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 LONRF3Q496Y0 759 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 C15orf39Q6ZRI6 1047 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 RNF135Q8IUD6 432 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 C4orf32Q8N8J7 132 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 SMG8Q8ND04 991 aaKnown RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 RASSF8Q8NHQ8 419 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 STAMQ92783 540 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 ACSF2Q96CM8 615 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 CPB2Q96IY4 423 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 UROC1Q96N76 676 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 HERC2P3Q9BVR0 1158 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 MRPL4Q9BYD3 311 aaKnown RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 PLEKHA4Q9H4M7 779 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 SLC38A7Q9NVC3 462 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 HCSTQ9UBK5 93 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 USTQ9Y2C2 406 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 PCDHB6Q9Y5E3 794 aa11.44□□□□□ -0.58
CDCA3-208ENST00000540683 TDRD15B5MCY1 1934 aaKnown RBP11.44□□□□□ -0.58
CDCA3-208ENST00000540683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.43□□□□□ -0.58
CDCA3-208ENST00000540683 LOC730098B7Z3J9 87 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 TADA2AO75478 443 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 GUCY2CP25092 1073 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 LONP1P36776 959 aaKnown RBP11.43□□□□□ -0.58
CDCA3-208ENST00000540683 SCNN1GP51170 649 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 DSC1Q08554 894 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 PTPN14Q15678 1187 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 HYIQ5T013 277 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 ATF7IP2Q5U623 682 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 ZNF280BQ86YH2 543 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 COLGALT2Q8IYK4 626 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 LRFN3Q9BTN0 628 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 APOL6Q9BWW8 343 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 EIF2AQ9BY44 585 aaKnown RBP11.43□□□□□ -0.58
CDCA3-208ENST00000540683 RHOBTB2Q9BYZ6 727 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 NXF3Q9H4D5 531 aaKnown RBP11.43□□□□□ -0.58
CDCA3-208ENST00000540683 EPHX3Q9H6B9 360 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 KMT5AQ9NQR1 393 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 LARSQ9P2J5 1176 aaKnown RBP11.43□□□□□ -0.58
CDCA3-208ENST00000540683 DNAJB4Q9UDY4 337 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 ADAM28Q9UKQ2 775 aa11.43□□□□□ -0.58
CDCA3-208ENST00000540683 WNT7AO00755 349 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 DTNBO60941 627 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 DDHD2O94830 711 aa11.42□□□□□ -0.58
CDCA3-208ENST00000540683 GLUD1P00367 558 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms