RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MAPTP10636 758 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 FGFR4P22455 802 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 GCLMP48507 274 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 AUHQ13825 339 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 MFSD5Q6N075 450 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 ZNF746Q6NUN9 644 aaPredicted RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 C12orf56Q8IXR9 622 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 CCDC105Q8IYK2 499 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 EPS8L3Q8TE67 593 aaKnown RBP13.21□□□□□ -0.29
NPC1-202ENST00000540608 TEKT3Q9BXF9 490 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 EHMT1Q9H9B1 1298 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
NPC1-202ENST00000540608 SLX4Q8IY92 1834 aa13.21□□□□□ -0.3
NPC1-202ENST00000540608 TCRBV7S2A1N4TA0A589 114 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 K7ENM7 598 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 RARAP10276 462 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 HMGB2P26583 209 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 ALCAMQ13740 583 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 SIX1Q15475 284 aaPredicted RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 TAOK1Q7L7X3 1001 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 FAM71AQ8IYT1 594 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 C12orf50Q8NA57 414 aaPredicted RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 NOCTQ9UK39 431 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 SLC12A4Q9UP95 1085 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 TNS1Q9HBL0 1735 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 PASKQ96RG2 1323 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 ANKRD63C9JTQ0 380 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 PMM2O15305 246 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 CYP1A2P05177 515 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 UBXN2AP68543 259 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 NEDD9Q14511 834 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 CNGA2Q16280 664 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 ZNF568Q3ZCX4 644 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 TRMT10CQ7L0Y3 403 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 UHMK1Q8TAS1 419 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 EPS8L1Q8TE68 723 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 ACCSQ96QU6 501 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 ELAC2Q9BQ52 826 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.3
NPC1-202ENST00000540608 CHORDC1Q9UHD1 332 aaPredicted RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 MCM8Q9UJA3 840 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 MYH11P35749 1972 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 LOC102724159A0A0B4J2E5 919 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 ENTPD3O75355 529 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 VIMP08670 466 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 SLCO1A2P46721 670 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 ELF3P78545 371 aaPredicted RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 PWP2Q15269 919 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 ACER1Q8TDN7 264 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 NSRP1Q9H0G5 558 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 LRRC19Q9H756 370 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 LARSQ9P2J5 1176 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 DBR1Q9UK59 544 aaKnown RBP13.2□□□□□ -0.3
NPC1-202ENST00000540608 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
NPC1-202ENST00000540608 TULP1O00294 542 aaPredicted RBP13.19□□□□□ -0.3
NPC1-202ENST00000540608 MAPK13O15264 365 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 CHRNA5P30532 468 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 XXYLT1Q8NBI6 393 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 ZNF564Q8TBZ8 553 aaPredicted RBP13.19□□□□□ -0.3
NPC1-202ENST00000540608 KAT5Q92993 513 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 RIT2Q99578 217 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 CBWD1Q9BRT8 395 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 NUP85Q9BW27 656 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 TISP43B9A030 160 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 IPO5O00410 1097 aaKnown RBP13.19□□□□□ -0.3
NPC1-202ENST00000540608 SPOPO43791 374 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 SLC8A1P32418 973 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 KCNJ1P48048 391 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 RWDD2BP57060 319 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 PDE4CQ08493 712 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 CALCOCO2Q13137 446 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 RASA3Q14644 834 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 TRPM8Q7Z2W7 1104 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 EXOC3L1Q86VI1 746 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 SLCO2A1Q92959 643 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 SCLT1Q96NL6 688 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
NPC1-202ENST00000540608 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
NPC1-202ENST00000540608 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
NPC1-202ENST00000540608 LOXHD1Q8IVV2 1947 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 H0YIN7 160 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 PLSCR1O15162 318 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 CYP26A1O43174 497 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
NPC1-202ENST00000540608 ECEL1O95672 775 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
NPC1-202ENST00000540608 PPP1R7Q15435 360 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 MIGA2Q7L4E1 593 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 MAEAQ7L5Y9 396 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
NPC1-202ENST00000540608 PLEKHO2Q8TD55 490 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms