RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 FAM167AQ96KS9 214 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 NOX5Q96PH1 765 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 AZI2Q9H6S1 392 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 SLC24A3Q9HC58 644 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 SLC45A1Q9Y2W3 748 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 PPME1Q9Y570 386 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 PLXNB2O15031 1838 aa10.45□□□□□ -0.74
CLIP1-212ENST00000540304 PLXNA1Q9UIW2 1896 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 CTAGE15A4D2H0 777 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 TPD52L2O43399 206 aaKnown RBP10.44□□□□□ -0.74
CLIP1-212ENST00000540304 CTAGE8P0CG41 777 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 MXI1P50539 228 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 CCNA1P78396 465 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 NAB2Q15742 525 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 KIAA0753Q2KHM9 967 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 CELF3Q5SZQ8 465 aaKnown RBP10.44□□□□□ -0.74
CLIP1-212ENST00000540304 TAS1R3Q7RTX0 852 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 USP37Q86T82 979 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 CTAGE6Q86UF2 777 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 CTAGE4Q8IX94 777 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 ANKRD13CQ8N6S4 541 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 GPRC5AQ8NFJ5 357 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 ASAP3Q8TDY4 903 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 GPR20Q99678 358 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 GPR88Q9GZN0 384 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 SALL4Q9UJQ4 1053 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 ASB14A6NK59 587 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 NOP56O00567 594 aaKnown RBP10.44□□□□□ -0.74
CLIP1-212ENST00000540304 EVI5O60447 810 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 GLRA2P23416 452 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 GTF2A2P52657 109 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 ENPEPQ07075 957 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 STRN3Q13033 797 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 PHLDB3Q6NSJ2 640 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 FBXO16Q8IX29 292 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-212ENST00000540304 GPD1LQ8N335 351 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 DEPTORQ8TB45 409 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 MFSD14AQ96MC6 490 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 TMEM117Q9H0C3 514 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 ARGLU1Q9NWB6 273 aaPredicted RBP10.44□□□□□ -0.74
CLIP1-212ENST00000540304 NAGPAQ9UK23 515 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 NENFQ9UMX5 172 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 USP20Q9Y2K6 914 aa10.44□□□□□ -0.74
CLIP1-212ENST00000540304 BTNL10A8MVZ5 291 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 PDHXO00330 501 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 LGR5O75473 907 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 LIG4P49917 911 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 NAP1L1P55209 391 aaKnown RBP10.43□□□□□ -0.74
CLIP1-212ENST00000540304 FKBP1BP68106 108 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CKAP4Q07065 602 aaKnown RBP10.43□□□□□ -0.74
CLIP1-212ENST00000540304 SRLQ86TD4 932 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 PARD3BQ8TEW8 1205 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 MS4A4AQ96JQ5 239 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 SNX12Q9UMY4 172 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CCL15-CCL14A0A0B4J2E2 113 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 LRRIQ4A6NIV6 560 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 LRRIQ3A6PVS8 624 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-212ENST00000540304 KIAA0391O15091 583 aaKnown RBP10.43□□□□□ -0.74
CLIP1-212ENST00000540304 BUB1O43683 1085 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 MAFO75444 373 aaPredicted RBP10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CAPN15O75808 1086 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 PRLRP16471 622 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 PAX3P23760 479 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 KLRC1P26715 233 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 GTF2H1P32780 548 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CYP24A1Q07973 514 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CCL15Q16663 113 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 HSDL1Q3SXM5 330 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 ARMC3Q5W041 872 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 KRT39Q6A163 491 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 ALKBH5Q6P6C2 394 aaKnown RBP10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CCDC62Q6P9F0 684 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 GLG1Q92896 1179 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 TATDN2Q93075 761 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 CCDC127Q96BQ5 260 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 FAXDC2Q96IV6 333 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 PACSIN1Q9BY11 444 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 KIAA1586Q9HCI6 787 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 TMEM8AQ9HCN3 771 aa10.43□□□□□ -0.74
CLIP1-212ENST00000540304 BTBD19C9JJ37 291 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 SRGAP2O75044 1071 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 PIGRP01833 764 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 PLPPR4Q7Z2D5 763 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 ARHGEF19Q8IW93 802 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 KLHL23Q8NBE8 558 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 SPATA33Q96N06 139 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 UBE2TQ9NPD8 197 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-212ENST00000540304 ETAA1Q9NY74 926 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 TSKSQ9UJT2 592 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 STYXL1Q9Y6J8 313 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 K7ERI5 159 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 DDX3XO00571 662 aaKnown RBP eCLIP10.42□□□□□ -0.74
CLIP1-212ENST00000540304 EXTL3O43909 919 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 TXNP10599 105 aaKnown RBP10.42□□□□□ -0.74
CLIP1-212ENST00000540304 GCLCP48506 637 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-212ENST00000540304 TTLL4Q14679 1199 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 KIF22Q14807 665 aa10.42□□□□□ -0.74
CLIP1-212ENST00000540304 ARMCX2Q7L311 632 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms