RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 LRRC57Q8N9N7 239 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ATP8B4Q8TF62 1192 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 LXNQ9BS40 222 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 AGPAT3Q9NRZ7 376 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 RAB20Q9NX57 234 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 KIF1AQ12756 1690 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 PPFIA2O75334 1257 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 RARGP13631 454 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ZCWPW2Q504Y3 356 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 AEBP2Q6ZN18 517 aaPredicted RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 ANKMY2Q8IV38 441 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 CCDC17Q96LX7 622 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ACCSQ96QU6 501 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 IMPG2Q9BZV3 1241 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 NPHS2Q9NP85 383 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 TCP10L2B9ZVM9 353 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 DNAJC8O75937 253 aaPredicted RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 RASIP1Q5U651 963 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.84□□□□□ -0.19
MSH6-210ENST00000540021 LRRC4CQ9HCJ2 640 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 ZFP69BQ9UJL9 534 aa13.84□□□□□ -0.19
MSH6-210ENST00000540021 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.19
MSH6-210ENST00000540021 FER1L4A9Z1Z3 1794 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 ASAP2O43150 1006 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 RTN2O75298 545 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 RARAP10276 462 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 GHRP10912 638 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 HES6Q96HZ4 224 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 RBM15Q96T37 977 aaKnown RBP eCLIP13.83□□□□□ -0.28e-10■■□□□ 12.9
MSH6-210ENST00000540021 PI4K2AQ9BTU6 479 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 TCRBV7S2A1N4TA0A589 114 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 SNX3O60493 162 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 GH1P01241 217 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 SLC12A3P55017 1021 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 NFIAQ12857 509 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 OVGP1Q12889 678 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 AUHQ13825 339 aaKnown RBP13.83□□□□□ -0.2
MSH6-210ENST00000540021 RBBP5Q15291 538 aaKnown RBP13.83□□□□□ -0.2
MSH6-210ENST00000540021 BBS9Q3SYG4 887 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 APBB1IPQ7Z5R6 666 aaPredicted RBP13.83□□□□□ -0.2
MSH6-210ENST00000540021 ZBED8Q8IZ13 594 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 PRELID2Q8N945 189 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 GBP5Q96PP8 586 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 TMEM117Q9H0C3 514 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 TRAF3IP3Q9Y228 551 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.83□□□□□ -0.2
MSH6-210ENST00000540021 FAM86B1E9PN63 330 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 SERPINB2P05120 415 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 KRT16P08779 473 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 ALAS1P13196 640 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 CD19P15391 556 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 XRCC4Q13426 336 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 ZNF394Q53GI3 561 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 DUPD1Q68J44 220 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 TTC17Q96AE7 1141 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 CFAP57Q96MR6 1250 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 ARHGEF10LQ9HCE6 1279 aa13.83□□□□□ -0.2
MSH6-210ENST00000540021 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 COL1A1P02452 1464 aaPredicted RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 EML1O00423 815 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 GSCP56915 257 aaPredicted RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 CNGA2Q16280 664 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 DAB2IPQ5VWQ8 1189 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 TRMT10CQ7L0Y3 403 aaKnown RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 PRUNE1Q86TP1 453 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 PGM2Q96G03 612 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 CBWD1Q9BRT8 395 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 EXOC7Q9UPT5 735 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 MYO5AQ9Y4I1 1855 aaKnown RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 ARHGAP42A6NI28 874 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 CES2O00748 559 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 PPP1R11O60927 126 aaPredicted RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 CDH16O75309 829 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 KRT1P04264 644 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 GPS1Q13098 491 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 P3H1Q32P28 736 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 EXOC3L1Q86VI1 746 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 SLC47A2Q86VL8 602 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 TRABDQ9H4I3 376 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 UBN1Q9NPG3 1134 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 A0A0A6YYK5 440 aaPredicted RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 CLRN2A0PK11 232 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 CIB2O75838 187 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 PIAS1O75925 651 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 PRELPP51888 382 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 TRAF1Q13077 416 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 RASA3Q14644 834 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 EAPPQ56P03 285 aaPredicted RBP13.82□□□□□ -0.2
MSH6-210ENST00000540021 MAML1Q92585 1016 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 TRIM4Q9C037 500 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 PCDHB4Q9Y5E5 795 aa13.82□□□□□ -0.2
MSH6-210ENST00000540021 GYG2O15488 501 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 177.3 ms