RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 EVPLQ92817 2033 aa18.33■□□□□ 0.52
COPS3-212ENST00000539941 A0A0B4J269 797 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 TULP2O00295 520 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 FKTNO75072 461 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 DUSP11O75319 330 aaKnown RBP18.32■□□□□ 0.52
COPS3-212ENST00000539941 PRKCBP05771 671 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 TNNT1P13805 278 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 PHKA2P46019 1235 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 FLT3LGP49771 235 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 SP3Q02447 781 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 C1orf220Q5T0J3 134 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 FMNL3Q8IVF7 1028 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 PLEKHO2Q8TD55 490 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 TSC1Q92574 1164 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 ARHGAP39Q9C0H5 1083 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 FZD8Q9H461 694 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 AIPL1Q9NZN9 384 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 USP20Q9Y2K6 914 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 NRCAMQ92823 1304 aa18.32■□□□□ 0.52
COPS3-212ENST00000539941 SSU72P8A0A1W2PR75 194 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 ACKR2O00590 384 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 TOM1L1O75674 476 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 CYBAP13498 195 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 MXI1P50539 228 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 DLG4P78352 724 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 PPP3CAQ08209 521 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 NCBP1Q09161 790 aaKnown RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 FAM187BQ17R55 369 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 EHBP1Q8NDI1 1231 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 VTI1AQ96AJ9 217 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 NLRP4Q96MN2 994 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 DESI2Q9BSY9 194 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 MSTO1Q9BUK6 570 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 KATNAL1Q9BW62 490 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 INTS2Q9H0H0 1204 aaKnown RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 NHEJ1Q9H9Q4 299 aaPredicted RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 TMEM8AQ9HCN3 771 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 EIF3CLB5ME19 914 aaKnown RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 HAS3O00219 553 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 KPNA6O60684 536 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 ACTN1P12814 892 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 KRT83P78385 493 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 CDC42EP1Q00587 391 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 PSMD6Q15008 389 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 EPC2Q52LR7 807 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 KAT2BQ92831 832 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 SPAG5Q96R06 1193 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 EIF3CQ99613 913 aaKnown RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 FAM213AQ9BRX8 229 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 PRMT7Q9NVM4 692 aaPredicted RBP18.31■□□□□ 0.52
COPS3-212ENST00000539941 GABRQQ9UN88 632 aa18.31■□□□□ 0.52
COPS3-212ENST00000539941 LRRIQ3A6PVS8 624 aaPredicted RBP18.3■□□□□ 0.52
COPS3-212ENST00000539941 CLDN3O15551 220 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 SERPING1P05155 500 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 EDN1P05305 212 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 GCLMP48507 274 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 CLDN10P78369 228 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 MBTD1Q05BQ5 628 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 MFSD10Q14728 455 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 KIAA0753Q2KHM9 967 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 SLC9C1Q4G0N8 1177 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 MARCH8Q5T0T0 291 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 KRT39Q6A163 491 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 TSHZ1Q6ZSZ6 1077 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 ZNF410Q86VK4 478 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 LMO3Q8TAP4 145 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 TRIB2Q92519 343 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 CCDC42Q96M95 316 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 TMEM117Q9H0C3 514 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 APEX2Q9UBZ4 518 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 AKT3Q9Y243 479 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 COQ4Q9Y3A0 265 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 FHOD1Q9Y613 1164 aa18.3■□□□□ 0.52
COPS3-212ENST00000539941 INO80B-WBP1J3KQ70 363 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 SMIM10L2AP0DMW4 78 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 SMIM10L2BP0DMW5 78 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
COPS3-212ENST00000539941 PSEN2P49810 448 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 JAM2P57087 298 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 APBA1Q02410 837 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 PRKCZQ05513 592 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 RAPGEF1Q13905 1077 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 FSCN1Q16658 493 aaKnown RBP18.29■□□□□ 0.52
COPS3-212ENST00000539941 TRPV1Q8NER1 839 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 LENG1Q96BZ8 264 aaPredicted RBP18.29■□□□□ 0.52
COPS3-212ENST00000539941 INO80BQ9C086 356 aaPredicted RBP18.29■□□□□ 0.52
COPS3-212ENST00000539941 HAPLN2Q9GZV7 340 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 IFT122Q9HBG6 1241 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 ARHGAP20Q9P2F6 1191 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 ANKFY1Q9P2R3 1169 aa18.29■□□□□ 0.52
COPS3-212ENST00000539941 BZW2Q9Y6E2 419 aaKnown RBP18.29■□□□□ 0.52
COPS3-212ENST00000539941 MBLAC1A4D2B0 266 aaPredicted RBP18.28■□□□□ 0.52
COPS3-212ENST00000539941 ZEB2O60315 1214 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 PROZP22891 400 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 HOXD10P28358 340 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 GJA9P57773 515 aa18.28■□□□□ 0.52
COPS3-212ENST00000539941 NLRP11P59045 1033 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms