RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 GJB4Q9NTQ9 266 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 ZFP69BQ9UJL9 534 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 IQCA1LA6NCM1 817 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 CCDC22O60826 627 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 NME3Q13232 169 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PIGHQ14442 188 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 MAPRE2Q15555 327 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF526Q8TF50 670 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 EPAS1Q99814 870 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 HEMGNQ9BXL5 484 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 NOP53Q9NZM5 478 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 NEXMIFQ5QGS0 1516 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 A8MXQ7 604 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 DPYSL4O14531 572 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 TRAPPC3O43617 180 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 E2F5Q15329 346 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 HIBCHQ6NVY1 386 aaPredicted RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 SLC44A5Q8NCS7 719 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 VPS11Q9H270 941 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 EHD2Q9NZN4 543 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 KCNH4Q9UQ05 1017 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 ESRRBO95718 433 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 MCF2P10911 925 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 BCAR1P56945 870 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 MAGOHP61326 146 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 KIRREL3Q8IZU9 778 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 SRBD1Q8N5C6 995 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PDCD6IPQ8WUM4 868 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 POLIQ9UNA4 740 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PNPLA6Q8IY17 1366 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 IQGAP1P46940 1657 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 CFAP73A6NFT4 308 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 MYO1DO94832 1006 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 HSD17B4P51659 736 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 COG2Q14746 738 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 GRAMD1BQ3KR37 738 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 CEP55Q53EZ4 464 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 ANGPTL8Q6UXH0 198 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 LDHDQ86WU2 507 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 RAPGEF5Q92565 580 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 C11orf70Q9BRQ4 267 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 SMARCAD1Q9H4L7 1026 aa6.87□□□□□ -1.31
LSAMP-207ENST00000539563 PDS5AQ29RF7 1337 aaKnown RBP6.87□□□□□ -1.31
LSAMP-207ENST00000539563 RAD51Q06609 339 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 STAT4Q14765 748 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 BEND6Q5SZJ8 279 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 FBXO38Q6PIJ6 1188 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ASAP3Q8TDY4 903 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 LZICQ8WZA0 190 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 RNF25Q96BH1 459 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PGBD4Q96DM1 585 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 A0A0G2JND7 137 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ANO4Q32M45 955 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SHC4Q6S5L8 630 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 NSUN4Q96CB9 384 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 GJD4Q96KN9 370 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MED15Q96RN5 788 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 BFARQ9NZS9 450 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TJP2Q9UDY2 1190 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MAFGO15525 162 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 HNRNPCL1O60812 293 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SRGAP2O75044 1071 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 IL18RAPO95256 599 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 CD4P01730 458 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ATP6V1E1P36543 226 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 NOP14P78316 857 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 EXOSC10Q01780 885 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 CYFIP1Q7L576 1253 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 HAUS6Q7Z4H7 955 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TBC1D1Q86TI0 1168 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TRIML2Q8N7C3 387 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 RNF217Q8TC41 542 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 DYRK4Q9NR20 520 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ABCF3Q9NUQ8 709 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SCHIP1Q9P0W5 487 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 FBXO2Q9UK22 296 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SYCE1LA8MT33 242 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 BNIP3LO60238 219 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PFDN1O60925 122 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TDP2O95551 362 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MAGEA9P43362 315 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 EIF3EP60228 445 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SF3B3Q15393 1217 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 XKR3Q5GH77 459 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 BTBD8Q5XKL5 378 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TRMT10CQ7L0Y3 403 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 NUDCD3Q8IVD9 361 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 DHX35Q9H5Z1 703 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PIDD1Q9HB75 910 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MRGBPQ9NV56 204 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ADGRG1Q9Y653 693 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TTC26A0AVF1 554 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 HNRNPCL2B2RXH8 293 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 NEMP1O14524 444 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MAGEB2O15479 319 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms