RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 MAP4K2Q12851 820 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 AUHQ13825 339 aaKnown RBP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 PCBP2Q15366 365 aaKnown RBP eCLIP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 CRB2Q5IJ48 1285 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 DCAF15Q66K64 600 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 RETSATQ6NUM9 610 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 USP53Q70EK8 1073 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 GPR155Q7Z3F1 870 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 FGD2Q7Z6J4 655 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 TBC1D1Q86TI0 1168 aaPredicted RBP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 KIF18BQ86Y91 864 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 ANKRD18AQ8IVF6 992 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 TRIM59Q8IWR1 403 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 C7orf61Q8IZ16 206 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 C1orf162Q8NEQ5 155 aaPredicted RBP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 SLC35G2Q8TBE7 412 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 NSUN6Q8TEA1 469 aaKnown RBP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 DCAF4Q8WV16 495 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 BTN2A2Q8WVV5 523 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 ATRIPQ8WXE1 791 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 OSBP2Q969R2 916 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 ZNF622Q969S3 477 aaKnown RBP eCLIP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 TAAR9Q96RI9 348 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 FOXP3Q9BZS1 431 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 MYLK2Q9H1R3 596 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 SLC52A2Q9HAB3 445 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 PDLIM7Q9NR12 457 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 SMC4Q9NTJ3 1288 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 APEX2Q9UBZ4 518 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 ABCF2Q9UG63 623 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 LRCH1Q9Y2L9 728 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 TMX2Q9Y320 296 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 EMC9Q9Y3B6 208 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 LAMC1P11047 1609 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 MLH3Q9UHC1 1453 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 MAST4O15021 2626 aa4.42□□□□□ -1.7
AC055720.1-201ENST00000539552 PARD3Q8TEW0 1356 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 TNRQ92752 1358 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 TRIOBPQ9H2D6 2365 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 A6NNZ2 444 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 NOTOA8MTQ0 251 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 RASA4BC9J798 803 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 C1QTNF3-AMACRE9PGA6 284 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 RBAK-RBAKDNI3L0D1 243 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 CLGNO14967 610 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 GSTA4O15217 222 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 RASA4O43374 803 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 CTNND1O60716 968 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 FZD7O75084 574 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ITGB3P05106 788 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 PRKCAP17252 672 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 PSMA3P25788 255 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 OAS2P29728 719 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 HOXC13P31276 330 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ADD2P35612 726 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 KRT83P78385 493 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 G3BP1Q13283 466 aaKnown RBP eCLIP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 NMIQ13287 307 aaPredicted RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 PPP2R5DQ14738 602 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 NR1I3Q14994 352 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 RRP12Q5JTH9 1297 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 GJC2Q5T442 439 aaPredicted RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 IFIT1BQ5T764 474 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 AGAP9Q5VTM2 703 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 KIAA1614Q5VZ46 1190 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 CWF19L1Q69YN2 538 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 SWSAP1Q6NVH7 229 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ZCCHC8Q6NZY4 707 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 CYP26C1Q6V0L0 522 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 LIPIQ6XZB0 460 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 C4orf50Q6ZRC1 276 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 FASTKD5Q7L8L6 764 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 PPFIBP1Q86W92 1011 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 HSCBQ8IWL3 235 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ZC3H7AQ8IWR0 971 aaKnown RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 LMNTD2Q8IXW0 634 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 TTC9BQ8N6N2 239 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 NUP43Q8NFH3 380 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 SYTL5Q8TDW5 730 aaPredicted RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 TBC1D20Q96BZ9 403 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 FAXDC2Q96IV6 333 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 HHIPL1Q96JK4 782 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 KREMEN1Q96MU8 473 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 C8orf49Q96NF6 230 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 SAMD11Q96NU1 681 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 FAM193BQ96PV7 902 aaPredicted RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ALG1Q9BT22 464 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 CENPOQ9BU64 300 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 SCAND2PQ9GZW5 306 aaPredicted RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 PRKRIP1Q9H875 184 aaPredicted RBP4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 FAM204AQ9H8W3 233 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 GP6Q9HCN6 339 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ARFGAP3Q9NP61 516 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 SAMD15Q9P1V8 674 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 TNFRSF10DQ9UBN6 386 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 SYNPO2Q9UMS6 1093 aa4.41□□□□□ -1.7
AC055720.1-201ENST00000539552 ZNF451Q9Y4E5 1061 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms