RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ARHGAP20Q9P2F6 1191 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 TFR2Q9UP52 801 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 PPME1Q9Y570 386 aa18.52■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZNF236Q9UL36 1845 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 TMEM88BA6NKF7 163 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 TULP1O00294 542 aaPredicted RBP18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 VAMP7P51809 220 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 KRT83P78385 493 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 SNRNP35Q16560 246 aaKnown RBP18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 IER5Q5VY09 327 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 IQSEC1Q6DN90 963 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 USP6NLQ92738 828 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 FAM204AQ9H8W3 233 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 PLCB1Q9NQ66 1216 aa18.51■□□□□ 0.55
PCDHB17P-201ENST00000539533 GTPBP10A4D1E9 387 aaKnown RBP18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 SRGAP2O75044 1071 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 PPFIA4O75335 1185 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 EDN1P05305 212 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 GJB1P08034 283 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 UCHL3P15374 230 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 TM4SF4P48230 202 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 IGBP1P78318 339 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 CDK17Q00537 523 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 STRN3Q13033 797 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 MAP9Q49MG5 647 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 C1orf220Q5T0J3 134 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 CYP4F22Q6NT55 531 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZNF662Q6ZS27 426 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 EHBP1Q8NDI1 1231 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 C16orf70Q9BSU1 422 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 RNF40O75150 1001 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 HOXC6P09630 235 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 SRGAP2CP0DJJ0 459 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 INSRRP14616 1297 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 CTGFP29279 349 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 LIG4P49917 911 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 PPP3CAQ08209 521 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 LAMTOR4Q0VGL1 99 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 GJB7Q6PEY0 223 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 FOXR1Q6PIV2 292 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 KIAA1328Q86T90 577 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 OR6J1Q8NGC5 347 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 GJD2Q9UKL4 321 aa18.5■□□□□ 0.55
PCDHB17P-201ENST00000539533 TARSL2A2RTX5 802 aaKnown RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 MAPK13O15264 365 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 ADCY3O60266 1144 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 GTF2A1P52655 376 aaPredicted RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 TNFAIP2Q03169 654 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 EFCAB12Q6NXP0 572 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 METTL13Q8N6R0 699 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 PSPC1Q8WXF1 523 aaKnown RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 JAKMIP2Q96AA8 810 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZNF668Q96K58 619 aaPredicted RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZBTB45Q96K62 511 aaPredicted RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 RPGRIP1Q96KN7 1286 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 AJAP1Q9UKB5 411 aaPredicted RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 KRT86O43790 486 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 SYF2O95926 243 aaKnown RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 ABCD1P33897 745 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 GCLMP48507 274 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 CLCN3P51790 818 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 CKAP4Q07065 602 aaKnown RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 HGSNATQ68CP4 663 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 RHPN2Q8IUC4 686 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 TCP11Q8WWU5 503 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 KCNN1Q92952 543 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 CCDC127Q96BQ5 260 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 CAPZA3Q96KX2 299 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 FBXL18Q96ME1 805 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 TARS2Q9BW92 718 aaKnown RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 SUCLA2Q9P2R7 463 aaPredicted RBP18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 HPCAL4Q9UM19 191 aa18.49■□□□□ 0.55
PCDHB17P-201ENST00000539533 TNPO2O14787 897 aaKnown RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 MMP3P08254 477 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 GARTP22102 1010 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 MYL7Q01449 175 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 RAPGEF1Q13905 1077 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 SFMBT2Q5VUG0 894 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 ICE2Q659A1 982 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 EXOC8Q8IYI6 725 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 CCDC170Q8IYT3 715 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 RNF149Q8NC42 400 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 CCDC42Q96M95 316 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 POP1Q99575 1024 aaKnown RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 HAPLN2Q9GZV7 340 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 TTLL13PA6NNM8 815 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 H3BRB1 525 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 DYNC1LI2O43237 492 aaPredicted RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 GAS2O43903 313 aaKnown RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 LRRN2O75325 713 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 C22orf31O95567 290 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 ZNF865P0CJ78 1059 aaPredicted RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 CYLC1P35663 651 aaPredicted RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 EIF4A3P38919 411 aaKnown RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 ARID5AQ03989 594 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 LRRC31Q6UY01 552 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 GPD1LQ8N335 351 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 LENG1Q96BZ8 264 aaPredicted RBP18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 FAM213AQ9BRX8 229 aa18.48■□□□□ 0.55
PCDHB17P-201ENST00000539533 TUT1Q9H6E5 874 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms