RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 COLGALT2Q8IYK4 626 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 CLIC6Q96NY7 704 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 ADPGKQ9BRR6 497 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 TMEM175Q9BSA9 504 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 CCSER1Q9C0I3 900 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 TMEM134Q9H6X4 195 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 C17orf75Q9HAS0 396 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 NGRNQ9NPE2 291 aaKnown RBP17.25■□□□□ 0.35
CIT-210ENST00000539413 SNTG2Q9NY99 539 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 KCND2Q9NZV8 630 aa17.25■□□□□ 0.35
CIT-210ENST00000539413 SRPRBQ9Y5M8 271 aaKnown RBP17.25■□□□□ 0.35
CIT-210ENST00000539413 CARNS1A5YM72 827 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 GRXCR2A6NFK2 248 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 PLS3P13797 630 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 NDUFV1P49821 464 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 DSC1Q08554 894 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 MCM6Q14566 821 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
CIT-210ENST00000539413 FOXD4L5Q5VV16 416 aaPredicted RBP17.24■□□□□ 0.35
CIT-210ENST00000539413 DDX53Q86TM3 631 aaKnown RBP17.24■□□□□ 0.35
CIT-210ENST00000539413 GPBP1Q86WP2 473 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 VPS52Q8N1B4 723 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 VN1R2Q8NFZ6 395 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 FOXD4L4Q8WXT5 416 aaPredicted RBP17.24■□□□□ 0.35
CIT-210ENST00000539413 RAD54LQ92698 747 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 VN1R3Q9BXE9 311 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 ZBP1Q9H171 429 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 CLEC1BQ9P126 229 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
CIT-210ENST00000539413 PRG3Q9Y2Y8 225 aaPredicted RBP17.24■□□□□ 0.35
CIT-210ENST00000539413 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
CIT-210ENST00000539413 TCF20Q9UGU0 1960 aaKnown RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 TNFRSF10AO00220 468 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 RECQL4O94761 1208 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 CA8P35219 290 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 OR1G1P47890 313 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 SLC39A14Q15043 492 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 PUS10Q3MIT2 529 aaKnown RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 MRPL43Q8N983 215 aaKnown RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 SPIRE2Q8WWL2 714 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 AUTS2Q8WXX7 1259 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 MSLNLQ96KJ4 702 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 CDCA3Q99618 268 aaPredicted RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 REEP2Q9BRK0 252 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 NTPCRQ9BSD7 190 aaKnown RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 TARS2Q9BW92 718 aaKnown RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 CXCL16Q9H2A7 254 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 MARCH5Q9NX47 278 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 BARX2Q9UMQ3 279 aaPredicted RBP17.23■□□□□ 0.35
CIT-210ENST00000539413 TNFSF13BQ9Y275 285 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 ZMYM2Q9UBW7 1377 aa17.23■□□□□ 0.35
CIT-210ENST00000539413 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 CXCL14O95715 111 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 CTSAP10619 480 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
CIT-210ENST00000539413 GRIK3Q13003 919 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 DCAF4L1Q3SXM0 396 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 TMEM161BQ8NDZ6 487 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 LARP4BQ92615 738 aaKnown RBP17.22■□□□□ 0.35
CIT-210ENST00000539413 RPS6KC1Q96S38 1066 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 ACO2Q99798 780 aaKnown RBP17.22■□□□□ 0.35
CIT-210ENST00000539413 MRPL4Q9BYD3 311 aaKnown RBP17.22■□□□□ 0.35
CIT-210ENST00000539413 PTPRHQ9HD43 1115 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
CIT-210ENST00000539413 ODF2LQ9ULJ1 636 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
CIT-210ENST00000539413 MORC2Q9Y6X9 1032 aaPredicted RBP17.22■□□□□ 0.35
CIT-210ENST00000539413 F8W810 466 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 PTGESO14684 152 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 MBTPS2O43462 519 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
CIT-210ENST00000539413 MAPTP10636 758 aaKnown RBP17.21■□□□□ 0.35
CIT-210ENST00000539413 DDIT3P35638 169 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 PKP1Q13835 747 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 KCNC3Q14003 757 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 GIT2Q14161 759 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 STK38Q15208 465 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 LLGL2Q6P1M3 1020 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 CEP120Q8N960 986 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
CIT-210ENST00000539413 CDT1Q9H211 546 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 LARSQ9P2J5 1176 aaKnown RBP17.21■□□□□ 0.35
CIT-210ENST00000539413 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 CD207Q9UJ71 328 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
CIT-210ENST00000539413 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.2■□□□□ 0.34
CIT-210ENST00000539413 FSD2A1L4K1 749 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 F13A1P00488 732 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 KRT18P05783 430 aaKnown RBP17.2■□□□□ 0.34
CIT-210ENST00000539413 SMTNP53814 917 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 NCKAP1LP55160 1127 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 STRN3Q13033 797 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 BMS1Q14692 1282 aaKnown RBP17.2■□□□□ 0.34
CIT-210ENST00000539413 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
CIT-210ENST00000539413 ZNF568Q3ZCX4 644 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
CIT-210ENST00000539413 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
CIT-210ENST00000539413 FAM178BQ8IXR5 827 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms