RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 CCDC151A5D8V7 595 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 SOWAHDA6NJG2 315 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 PMM2O15305 246 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 MSCO60682 206 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 HSPA8P11142 646 aaKnown RBP9.61□□□□□ -0.87
DDB1-213ENST00000539332 OAS2P29728 719 aaKnown RBP9.61□□□□□ -0.87
DDB1-213ENST00000539332 ADSSP30520 456 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 CYP2J2P51589 502 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 MFSD10Q14728 455 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 ZSCAN26Q16670 478 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 CNPY4Q8N129 248 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 GOLGA1Q92805 767 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 TMEM143Q96AN5 459 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 CBWD1Q9BRT8 395 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 KIFC3Q9BVG8 833 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 TMEM134Q9H6X4 195 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 ST7Q9NRC1 585 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 HSPBP1Q9NZL4 362 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 FRMD4BQ9Y2L6 1034 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 STYXL1Q9Y6J8 313 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 MYH10P35580 1976 aa9.61□□□□□ -0.87
DDB1-213ENST00000539332 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 TISP43B9A030 160 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 ANKRD63C9JTQ0 380 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 HAS3O00219 553 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 RPS6KA5O75582 802 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 URI1O94763 535 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 C22orf31O95567 290 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 GARTP22102 1010 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CST5P28325 142 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 CASQ1P31415 396 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CHMP4BP1P59074 171 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 IGBP1P78318 339 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 BFSP1Q12934 665 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 PPFIA1Q13136 1202 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CAPSQ13938 189 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 MTF1Q14872 753 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 GRIK4Q16099 956 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 SLC9C1Q4G0N8 1177 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 IER5Q5VY09 327 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LHX8Q68G74 356 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CDCA2Q69YH5 1023 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 PDXDC1Q6P996 788 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CXCL17Q6UXB2 119 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LEKR1Q6ZMV7 388 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 TOGARAM2Q6ZUX3 1019 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 INTS8Q75QN2 995 aaKnown RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 XXYLT1Q8NBI6 393 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 KLHDC9Q8NEP7 349 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 NEK11Q8NG66 645 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 HNRNPLLQ8WVV9 542 aaKnown RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 SYN2Q92777 582 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 JPH2Q9BR39 696 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 SIX2Q9NPC8 291 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 FAM207AQ9NSI2 230 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 DAAM1Q9Y4D1 1078 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 RALGAPA2Q2PPJ7 1873 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CITO14578 2027 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 KIAA0391O15091 583 aaKnown RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 ZEB2O60315 1214 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 EXOC3O60645 756 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 ERLIN1O75477 346 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 KLRC1P26715 233 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 PSEN2P49810 448 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LBX1P52954 281 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 DRP2Q13474 957 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 EXOC3L4Q17RC7 722 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 C1orf220Q5T0J3 134 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 MARCH8Q5T0T0 291 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CCSAPQ6IQ19 270 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 TRIM65Q6PJ69 517 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LRRC71Q8N4P6 559 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LINC01465Q8N7H1 131 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LMBR1Q8WVP7 490 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 TCP11Q8WWU5 503 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 PRPF31Q8WWY3 499 aaKnown RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 ZBTB10Q96DT7 871 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 CHP1Q99653 195 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 MTG1Q9BT17 334 aaPredicted RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 LSM14BQ9BX40 385 aaKnown RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.872e-8■□□□□ 11
DDB1-213ENST00000539332 CCDC113Q9H0I3 377 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
DDB1-213ENST00000539332 ACBD3Q9H3P7 528 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 MMRN2Q9H8L6 949 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 SUGCTQ9HAC7 445 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 SETD4Q9NVD3 440 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 MYO6Q9UM54 1294 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 USP20Q9Y2K6 914 aa9.6□□□□□ -0.87
DDB1-213ENST00000539332 NRCAMQ92823 1304 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 RRN3P2A6NIE6 340 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 VGLL3A8MV65 326 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 POLR3GO15318 223 aaPredicted RBP9.59□□□□□ -0.87
DDB1-213ENST00000539332 P4HA2O15460 535 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 MAGEB2O15479 319 aa9.59□□□□□ -0.87
DDB1-213ENST00000539332 ASGR1P07306 291 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms