RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 SMOC2Q9H3U7 446 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 GIT1Q9Y2X7 761 aa13.89□□□□□ -0.19
VAMP1-206ENST00000538970 ZMYM2Q9UBW7 1377 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 A0A087WWV3 80 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 MED19A0JLT2 244 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-206ENST00000538970 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 F8W810 466 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 C2CD2LO14523 706 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-206ENST00000538970 XRCC6P12956 609 aaKnown RBP eCLIP13.88□□□□□ -0.19
VAMP1-206ENST00000538970 GLUD2P49448 558 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 SLC27A1Q6PCB7 646 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 C15orf39Q6ZRI6 1047 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 CCDC149Q6ZUS6 474 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 CDR2LQ86X02 465 aaPredicted RBP13.88□□□□□ -0.19
VAMP1-206ENST00000538970 HACE1Q8IYU2 909 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 GSTCDQ8NEC7 633 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
VAMP1-206ENST00000538970 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 TEX28O15482 410 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 MED24O75448 989 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 NPTXRO95502 500 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 ADH1AP07327 375 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 AKAP5P24588 427 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 MCM7P33993 719 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 NBL1P41271 181 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 DSG1Q02413 1049 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 KIAA0319Q5VV43 1072 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 CDCA2Q69YH5 1023 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-206ENST00000538970 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 CATSPER3Q86XQ3 398 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 MCPH1Q8NEM0 835 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 CMASQ8NFW8 434 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-206ENST00000538970 RXFP1Q9HBX9 757 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 TUFT1Q9NNX1 390 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 MAN1C1Q9NR34 630 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 CHST7Q9NS84 486 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 PRMT7Q9NVM4 692 aaPredicted RBP13.87□□□□□ -0.19
VAMP1-206ENST00000538970 LIMD1Q9UGP4 676 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 DNAH14Q0VDD8 3507 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 ZFHX4Q86UP3 3567 aa13.87□□□□□ -0.19
VAMP1-206ENST00000538970 LRRIQ4A6NIV6 560 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 EIF5BO60841 1220 aaKnown RBP13.86□□□□□ -0.19
VAMP1-206ENST00000538970 NR1I2O75469 434 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 SEC24BO95487 1268 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 GLUD1P00367 558 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 NUBP1P53384 320 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 GRIK3Q13003 919 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 SAFBQ15424 915 aaKnown RBP eCLIP13.86□□□□□ -0.19
VAMP1-206ENST00000538970 POTEGQ6S5H5 508 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 MAEAQ7L5Y9 396 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 OTOP3Q7RTS5 596 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 FRMD5Q7Z6J6 570 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 ADSSL1Q8N142 457 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 ACSF2Q96CM8 615 aaPredicted RBP13.86□□□□□ -0.19
VAMP1-206ENST00000538970 PRIMPOLQ96LW4 560 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 POLR3CQ9BUI4 534 aaPredicted RBP13.86□□□□□ -0.19
VAMP1-206ENST00000538970 COLEC11Q9BWP8 271 aa13.86□□□□□ -0.19
VAMP1-206ENST00000538970 DMXL1Q9Y485 3027 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 PTPRZ1P23471 2315 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-206ENST00000538970 OR52Z1P0C646 297 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 ORC2Q13416 577 aaPredicted RBP13.85□□□□□ -0.19
VAMP1-206ENST00000538970 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 ZBTB8OSQ8IWT0 167 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 TMEM105Q8N8V8 129 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 C8orf76Q96K31 380 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 B3GALT6Q96L58 329 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 NACC1Q96RE7 527 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 RHOBTB2Q9BYZ6 727 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 FZD8Q9H461 694 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 KLK14Q9P0G3 267 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 PARP2Q9UGN5 583 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 DPP7Q9UHL4 492 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 ADAM28Q9UKQ2 775 aa13.85□□□□□ -0.19
VAMP1-206ENST00000538970 C2orf16Q68DN1 1984 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 PAPLNO95428 1278 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 RPA1P27694 616 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 FAM187BQ17R55 369 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 ELMSAN1Q6PJG2 1045 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 CYP26C1Q6V0L0 522 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 CCDC83Q8IWF9 413 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 GPR65Q8IYL9 337 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 ERMNQ8TAM6 284 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 BSNDQ8WZ55 320 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 LLPHQ9BRT6 129 aaKnown RBP13.84□□□□□ -0.19
VAMP1-206ENST00000538970 C2orf40Q9H1Z8 148 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 FOXP1Q9H334 677 aaPredicted RBP13.84□□□□□ -0.19
VAMP1-206ENST00000538970 PDZD7Q9H5P4 517 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.84□□□□□ -0.19
VAMP1-206ENST00000538970 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
VAMP1-206ENST00000538970 CCDC195A0A1B0GUA6 201 aa13.83□□□□□ -0.2
VAMP1-206ENST00000538970 N4BP3O15049 544 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms