RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 MYBPC2Q14324 1141 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 SNRNP35Q16560 246 aaKnown RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 SPDYE2Q495Y8 402 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 ICE2Q659A1 982 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 ZNF564Q8TBZ8 553 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 NEK9Q8TD19 979 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
CPNE8-203ENST00000538596 COL2A1P02458 1487 aaPredicted RBP12.87□□□□□ -0.35
CPNE8-203ENST00000538596 FAM187AA6NFU0 413 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 SPOPO43791 374 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 CCNE2O96020 404 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 RARAP10276 462 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 CTNNA2P26232 953 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 HADHBP55084 474 aaKnown RBP12.86□□□□□ -0.35
CPNE8-203ENST00000538596 C2CD6Q53TS8 623 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 MMS22LQ6ZRQ5 1243 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 MICALCLQ6ZW33 695 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 TAS1R2Q8TE23 839 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 EPS8L3Q8TE67 593 aaKnown RBP12.86□□□□□ -0.35
CPNE8-203ENST00000538596 CD101Q93033 1021 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 PI4K2AQ9BTU6 479 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 TRIM7Q9C029 511 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 ZNFX1Q9P2E3 1918 aaKnown RBP12.86□□□□□ -0.35
CPNE8-203ENST00000538596 MIF4GDA9UHW6 222 aaKnown RBP12.86□□□□□ -0.35
CPNE8-203ENST00000538596 ATP2C2O75185 946 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 CYP11B1P15538 503 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 XKR9Q5GH70 373 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 SEL1L2Q5TEA6 688 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 DENND2CQ68D51 928 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 LLGL2Q6P1M3 1020 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 FMNL3Q8IVF7 1028 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 SYTL5Q8TDW5 730 aaPredicted RBP12.86□□□□□ -0.35
CPNE8-203ENST00000538596 TATDN2Q93075 761 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 SEC16BQ96JE7 1060 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 SELENOSQ9BQE4 189 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 DBR1Q9UK59 544 aaKnown RBP12.86□□□□□ -0.35
CPNE8-203ENST00000538596 USP20Q9Y2K6 914 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 UBIAD1Q9Y5Z9 338 aa12.86□□□□□ -0.35
CPNE8-203ENST00000538596 ATXN2Q99700 1313 aaKnown RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 FSBPO95073 299 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CHRNA3P32297 505 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 TNIP1Q15025 636 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 NBPF9Q3BBW0 867 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 DAB2IPQ5VWQ8 1189 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CCDC25Q86WR0 208 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 SPATS2Q86XZ4 545 aaKnown RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 BSNDQ8WZ55 320 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 GMLQ99445 158 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 OSBPL7Q9BZF2 842 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 RASAL2Q9UJF2 1139 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 PFASO15067 1338 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 COL4A5P29400 1685 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 P4HA2O15460 535 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 SORBS3O60504 671 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 DLATP10515 647 aaKnown RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CHN1P15882 459 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CNGA1P29973 690 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 RPS6P62753 249 aaKnown RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 SNX1Q13596 522 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 SIX1Q15475 284 aaPredicted RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CCDC38Q502W7 563 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 SLC13A5Q86YT5 568 aaPredicted RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 C12orf56Q8IXR9 622 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CCDC13Q8IYE1 715 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 PRPF38AQ8NAV1 312 aaKnown RBP12.85□□□□□ -0.35
CPNE8-203ENST00000538596 HELQQ8TDG4 1101 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 C1orf54Q8WWF1 131 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 SHC3Q92529 594 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 MTFR1LQ9H019 292 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 ADAM7Q9H2U9 754 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 PCYOX1Q9UHG3 505 aa12.85□□□□□ -0.35
CPNE8-203ENST00000538596 TESPA1A2RU30 521 aaPredicted RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 CLDN3O15551 220 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 CTNND1O60716 968 aaKnown RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 PLA2G6O60733 806 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 NUDT17P0C025 328 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 COILP38432 576 aaPredicted RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 NPTX2P47972 431 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 PPP2R5EQ16537 467 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 SLC39A4Q6P5W5 647 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 YTHDF3Q7Z739 585 aaKnown RBP12.84□□□□□ -0.35
CPNE8-203ENST00000538596 LARGE2Q8N3Y3 721 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 CABS1Q96KC9 395 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 RPS6KC1Q96S38 1066 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 TBX20Q9UMR3 447 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 DNM1LO00429 736 aa12.84□□□□□ -0.35
CPNE8-203ENST00000538596 PAEPP09466 180 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms