RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 KCNJ1P48048 391 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 PTDSS1P48651 473 aaKnown RBP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 RPS8P62241 208 aaKnown RBP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 KIF22Q14807 665 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 SIX1Q15475 284 aaPredicted RBP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 RHBDF2Q6PJF5 856 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 DNAJC9Q8WXX5 260 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 SLCO2A1Q92959 643 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 UIMC1Q96RL1 719 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 APEX2Q9UBZ4 518 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 DNM3Q9UQ16 869 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 ACTL7BQ9Y614 415 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 USH1CQ9Y6N9 552 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 NHSQ6T4R5 1651 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 SRCAPQ6ZRS2 3230 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 TARSP26639 723 aaKnown RBP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 STAT3P40763 770 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 IL9RQ01113 521 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 TXNRD3Q86VQ6 643 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 CATSPER3Q86XQ3 398 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 WDR66Q8TBY9 1149 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 GJD4Q96KN9 370 aaPredicted RBP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 AGPAT1Q99943 283 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 LRRC19Q9H756 370 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 SRP68Q9UHB9 627 aaKnown RBP19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 MYO3BQ8WXR4 1341 aa19.9■□□□□ 0.78
SFSWAP-207ENST00000538548 FAM170AA1A519 330 aa19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 TMEM110-MUSTN1A8MSY1 372 aa19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 GCNT3O95395 438 aa19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 FOXN2P32314 431 aa19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 PDCD2Q16342 344 aaPredicted RBP19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 HAO1Q9UJM8 370 aa19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 CHKBQ9Y259 395 aa19.89■□□□□ 0.78
SFSWAP-207ENST00000538548 MAPK13O15264 365 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 ITIH2P19823 946 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 ALDH3A1P30838 453 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 RASSF2P50749 326 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 PSMC6P62333 389 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 SNX1Q13596 522 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 TMEM154Q6P9G4 183 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 FAM47EQ6ZV65 393 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 SLFN12Q8IYM2 578 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 CD101Q93033 1021 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 TBC1D10AQ9BXI6 508 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 PPP1R11O60927 126 aaPredicted RBP19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 CDH16O75309 829 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 FTLP02792 175 aaPredicted RBP19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 CHKAP35790 457 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 GPC5P78333 572 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 RNASELQ05823 741 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 MTHFD1LQ6UB35 978 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 SRRM1Q8IYB3 904 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 CYP4X1Q8N118 509 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 RBBP8NLQ8NC74 664 aaPredicted RBP19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 KIAA1683Q9H0B3 1180 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 INTS2Q9H0H0 1204 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 VCXQ9H320 206 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 JMJD4Q9H9V9 463 aa19.89■□□□□ 0.77
SFSWAP-207ENST00000538548 MAGEB2O15479 319 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 TGFB1I1O43294 461 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 DCTN3O75935 186 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 LMNAP02545 664 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 SNHG28P0DPA3 235 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 KCNA1Q09470 495 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 KYNUQ16719 465 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 SLC5A9Q2M3M2 681 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 LONP2Q86WA8 852 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 ERMNQ8TAM6 284 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 FBXO41Q8TF61 875 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 SLC7A6OSQ96CW6 309 aaPredicted RBP19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 MKNK1Q9BUB5 465 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 DNAJC18Q9H819 358 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 PSTPIP2Q9H939 334 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 ATF5Q9Y2D1 282 aaPredicted RBP19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 C2CD2Q9Y426 696 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 THAP12O43422 761 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 LDHCP07864 332 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 SP100P23497 879 aaPredicted RBP19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 KRT17Q04695 432 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 MESDQ14696 234 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 RNF207Q6ZRF8 634 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 CFAP61Q8NHU2 1237 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 POP1Q99575 1024 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 USP20Q9Y2K6 914 aa19.88■□□□□ 0.77
SFSWAP-207ENST00000538548 TRAFD1O14545 582 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 TBCAO75347 108 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 MOGSQ13724 837 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 NFIL3Q16649 462 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 IRGCQ6NXR0 463 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 SEPT12Q8IYM1 358 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 ANKRD35Q8N283 1001 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 DCLRE1BQ9H816 532 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 GPCPD1Q9NPB8 672 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 NAALADL1Q9UQQ1 740 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 FAM47DPA6NHR8 397 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 RSPH10B2B2RC85 870 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 MEIS1O00470 390 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 MAP3K13O43283 966 aa19.87■□□□□ 0.77
SFSWAP-207ENST00000538548 MTA2O94776 668 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms