RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 DENND3A2RUS2 1198 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 MAPK13O15264 365 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 LRRN2O75325 713 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 UBA1P22314 1058 aaKnown RBP11.64□□□□□ -0.55
CLIP1-210ENST00000538120 SMTNP53814 917 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 RTP1P59025 263 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 DMP1Q13316 513 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-210ENST00000538120 TTLL12Q14166 644 aaPredicted RBP11.64□□□□□ -0.55
CLIP1-210ENST00000538120 NAB2Q15742 525 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 NBPF20Q3BBV1 942 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 PHLDB3Q6NSJ2 640 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 TAS1R3Q7RTX0 852 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 RNF10Q8N5U6 811 aaKnown RBP11.64□□□□□ -0.55
CLIP1-210ENST00000538120 MICAL1Q8TDZ2 1067 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 HDAC7Q8WUI4 952 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 OPTNQ96CV9 577 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 SELENOOQ9BVL4 669 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 STK33Q9BYT3 514 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 JRKLQ9Y4A0 524 aa11.64□□□□□ -0.55
CLIP1-210ENST00000538120 BZW2Q9Y6E2 419 aaKnown RBP11.64□□□□□ -0.55
CLIP1-210ENST00000538120 GOLGA8IPA6NC78 632 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 GOLGA8JA6NMD2 632 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 F8VZ95 297 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 BUB1O43683 1085 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 KRT13P13646 458 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 OSBPP22059 807 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 KLRC1P26715 233 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 CNGA1P29973 690 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 NF2P35240 595 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 MTERF2Q49AM1 385 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 CBWD2Q8IUF1 395 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 MCPH1Q8NEM0 835 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 ATP6V0A4Q9HBG4 840 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 ZNF302Q9NR11 478 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 WDR81Q562E7 1941 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 DDX3XO00571 662 aaKnown RBP eCLIP11.63□□□□□ -0.55
CLIP1-210ENST00000538120 GFPT2O94808 682 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 FARP2O94887 1054 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-210ENST00000538120 SOX5P35711 763 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 STAT1P42224 750 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 MAGEA9P43362 315 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 EMP3P54852 163 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 DRAP1Q14919 205 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-210ENST00000538120 EPC2Q52LR7 807 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 LDLRAD1Q5T700 205 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-210ENST00000538120 DNAAF5Q86Y56 855 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 SYT11Q9BT88 431 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 POLR3FQ9H1D9 316 aaPredicted RBP11.63□□□□□ -0.55
CLIP1-210ENST00000538120 SMARCAL1Q9NZC9 954 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 APEX2Q9UBZ4 518 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 NAGPAQ9UK23 515 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 SNX12Q9UMY4 172 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 EXOC7Q9UPT5 735 aa11.63□□□□□ -0.55
CLIP1-210ENST00000538120 SLC25A27O95847 323 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 OATP04181 439 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 PGK2P07205 417 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 FERP16591 822 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 GCLMP48507 274 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 CORO7P57737 925 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 GOLGA6L1Q8N7Z2 621 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 SLC30A5Q8TAD4 765 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 SAAL1Q96ER3 474 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 NOX5Q96PH1 765 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 PSMB7Q99436 277 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-210ENST00000538120 ARHGAP28Q9P2N2 729 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 ARID2Q68CP9 1835 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 GLTPD2A6NH11 291 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 A6NJR5 290 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 PMM2O15305 246 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 P4HA2O15460 535 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 NCK2O43639 380 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 PPFIA4O75335 1185 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 PRLRP16471 622 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 ANXA13P27216 316 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 EMC2Q15006 297 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 KIAA0753Q2KHM9 967 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 MAP9Q49MG5 647 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 CREG2Q8IUH2 290 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 ARHGEF19Q8IW93 802 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 LNX1Q8TBB1 728 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-210ENST00000538120 FBXL18Q96ME1 805 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 TLR10Q9BXR5 811 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 NIFKQ9BYG3 293 aaKnown RBP11.62□□□□□ -0.55
CLIP1-210ENST00000538120 TMEM117Q9H0C3 514 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 DHX33Q9H6R0 707 aaKnown RBP11.62□□□□□ -0.55
CLIP1-210ENST00000538120 EHD2Q9NZN4 543 aa11.62□□□□□ -0.55
CLIP1-210ENST00000538120 DMGDHQ9UI17 866 aaKnown RBP11.62□□□□□ -0.55
CLIP1-210ENST00000538120 DNAJC25-GNG10A0A024R161 153 aa11.61□□□□□ -0.55
CLIP1-210ENST00000538120 TARSL2A2RTX5 802 aaKnown RBP11.61□□□□□ -0.55
CLIP1-210ENST00000538120 BTNL10A8MVZ5 291 aa11.61□□□□□ -0.55
CLIP1-210ENST00000538120 ARIH2O95376 493 aa11.61□□□□□ -0.55
CLIP1-210ENST00000538120 SLC7A5Q01650 507 aa11.61□□□□□ -0.55
CLIP1-210ENST00000538120 TARBP2Q15633 366 aaKnown RBP11.61□□□□□ -0.55
CLIP1-210ENST00000538120 SNRNP35Q16560 246 aaKnown RBP11.61□□□□□ -0.55
CLIP1-210ENST00000538120 LY6KQ17RY6 165 aa11.61□□□□□ -0.55
CLIP1-210ENST00000538120 C10orf76Q5T2E6 689 aa11.61□□□□□ -0.55
CLIP1-210ENST00000538120 EEPD1Q7L9B9 569 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms