RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 SEZ6Q53EL9 994 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 ZBTB10Q96DT7 871 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 ZNF668Q96K58 619 aaPredicted RBP18.88■□□□□ 0.61
SNX17-210ENST00000537606 GPR20Q99678 358 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 TARS2Q9BW92 718 aaKnown RBP18.88■□□□□ 0.61
SNX17-210ENST00000537606 ANKFY1Q9P2R3 1169 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 DMGDHQ9UI17 866 aaKnown RBP18.88■□□□□ 0.61
SNX17-210ENST00000537606 ZBTB41Q5SVQ8 909 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 MEI1Q5TIA1 1274 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 ZNF771Q7L3S4 317 aaPredicted RBP18.88■□□□□ 0.61
SNX17-210ENST00000537606 LRRC71Q8N4P6 559 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 SPATA33Q96N06 139 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 PLEKHA4Q9H4M7 779 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 TMEM8AQ9HCN3 771 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 OSGEPQ9NPF4 335 aa18.88■□□□□ 0.61
SNX17-210ENST00000537606 TTLL13PA6NNM8 815 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 SGPL1O95470 568 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 HARSP12081 509 aaKnown RBP18.87■□□□□ 0.61
SNX17-210ENST00000537606 GARTP22102 1010 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 NAMPTP43490 491 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 CAPSQ13938 189 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 CELF3Q5SZQ8 465 aaKnown RBP18.87■□□□□ 0.61
SNX17-210ENST00000537606 GJC2Q5T442 439 aaPredicted RBP18.87■□□□□ 0.61
SNX17-210ENST00000537606 TAF3Q5VWG9 929 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 DHX37Q8IY37 1157 aaKnown RBP18.87■□□□□ 0.61
SNX17-210ENST00000537606 ZNF516Q92618 1163 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 TATDN2Q93075 761 aa18.87■□□□□ 0.61
SNX17-210ENST00000537606 RBM12Q9NTZ6 932 aaKnown RBP18.87■□□□□ 0.61
SNX17-210ENST00000537606 IQCA1LA6NCM1 817 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 ZNF233A6NK53 670 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 ECM2O94769 699 aaPredicted RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 CCDC172P0C7W6 258 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 TXNP10599 105 aaKnown RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 KIF22Q14807 665 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 TRAPPC12Q8WVT3 735 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 PRPF31Q8WWY3 499 aaKnown RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 MPHOSPH6Q99547 160 aaKnown RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 AGPAT1Q99943 283 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 RAB20Q9NX57 234 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 BTNL10A8MVZ5 291 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 CYP26A1O43174 497 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 ANXA13P27216 316 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 TNNT3P45378 269 aaPredicted RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 FBXL13Q8NEE6 735 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 TPCN2Q8NHX9 752 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 TMC2Q8TDI7 906 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 AFAP1L1Q8TED9 768 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 DHX38Q92620 1227 aaKnown RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 MROH8Q9H579 483 aa18.86■□□□□ 0.61
SNX17-210ENST00000537606 AGO2Q9UKV8 859 aaKnown RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
SNX17-210ENST00000537606 H0YCG3 227 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 PDHXO00330 501 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 SRGAP2CP0DJJ0 459 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 RFX1P22670 979 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 SLC47A2Q86VL8 602 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 RPUSD2Q8IZ73 545 aaKnown RBP18.85■□□□□ 0.61
SNX17-210ENST00000537606 MMGT1Q8N4V1 131 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 ZNFX1Q9P2E3 1918 aaKnown RBP18.85■□□□□ 0.61
SNX17-210ENST00000537606 TARSL2A2RTX5 802 aaKnown RBP18.85■□□□□ 0.61
SNX17-210ENST00000537606 EXTL3O43909 919 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 CALCAP01258 141 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 PRPF4BQ13523 1007 aaKnown RBP18.85■□□□□ 0.61
SNX17-210ENST00000537606 CCDC62Q6P9F0 684 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 PNMA8AQ86V59 439 aaPredicted RBP18.85■□□□□ 0.61
SNX17-210ENST00000537606 HELQQ8TDG4 1101 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 ARHGEF26Q96DR7 871 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 THAP2Q9H0W7 228 aa18.85■□□□□ 0.61
SNX17-210ENST00000537606 CHORDC1Q9UHD1 332 aaPredicted RBP18.85■□□□□ 0.61
SNX17-210ENST00000537606 MAFO75444 373 aaPredicted RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 TUBBP07437 444 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 GJB1P08034 283 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 TNNI1P19237 187 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 RFC5P40937 340 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 PAFAH1B1P43034 410 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 MKRN4PQ13434 485 aaPredicted RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 CRELD2Q6UXH1 353 aaPredicted RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 ZNF572Q7Z3I7 529 aaPredicted RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 LRRC57Q8N9N7 239 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 SLC35G2Q8TBE7 412 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 PSPC1Q8WXF1 523 aaKnown RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 COQ4Q9Y3A0 265 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 PTPRJQ12913 1337 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 BTBD19C9JJ37 291 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 GPC3P51654 580 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 CCNI2Q6ZMN8 369 aaPredicted RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 DAAM2Q86T65 1068 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 NOP9Q86U38 636 aaKnown RBP18.84■□□□□ 0.61
SNX17-210ENST00000537606 GPRC5AQ8NFJ5 357 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 TSKSQ9UJT2 592 aa18.84■□□□□ 0.61
SNX17-210ENST00000537606 CCL15-CCL14A0A0B4J2E2 113 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 ZBTB42B2RXF5 422 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 KCNK3O14649 394 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 PMM2O15305 246 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 COPB2P35606 906 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 MFAP3P55082 362 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 RPS6KA1Q15418 735 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 CCL15Q16663 113 aa18.83■□□□□ 0.61
SNX17-210ENST00000537606 KCTD19Q17RG1 926 aaPredicted RBP18.83■□□□□ 0.61
SNX17-210ENST00000537606 ARMCX2Q7L311 632 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms