RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 RPUSD2Q8IZ73 545 aaKnown RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 DDX1Q92499 740 aaKnown RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 SEC14L1Q92503 715 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 CARD9Q9H257 536 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 KIAA1586Q9HCI6 787 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 EXTL3O43909 919 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 CNMDO75829 334 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 FARP2O94887 1054 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 SGPL1O95470 568 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 ECHS1P30084 290 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 FMO1Q01740 532 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 GCNT1Q02742 428 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PSMD6Q15008 389 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 HSP90B2PQ58FF3 399 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 SND1Q7KZF4 910 aaKnown RBP eCLIP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 IFT74Q96LB3 600 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PCYT2Q99447 389 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 SLITRK6Q9H5Y7 841 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 ADARB2Q9NS39 739 aaKnown RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 TOPORSQ9NS56 1045 aaPredicted RBP10.05□□□□□ -0.8
UBE3B-207ENST00000537063 RAB20Q9NX57 234 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 VPS18Q9P253 973 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 PPME1Q9Y570 386 aa10.05□□□□□ -0.8
UBE3B-207ENST00000537063 HNRNPDLO14979 420 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 CEP104O60308 925 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 RNF40O75150 1001 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 UBA1P22314 1058 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 GGCXP38435 758 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 NAMPTP43490 491 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 MRPS25P82663 173 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 POU5F1Q01860 360 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 ALS2CLQ60I27 953 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 SV2AQ7L0J3 742 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 ENOSF1Q7L5Y1 443 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 TSEN2Q8NCE0 465 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 TAS1R2Q8TE23 839 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 POMGNT1Q8WZA1 660 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 CCDC102AQ96A19 550 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 FAM81BQ96LP2 452 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 GSTTP1A0A1W2PQM5 241 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 SOWAHBA6NEL2 793 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 CYP1A2P05177 515 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 RFC5P40937 340 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 CARSP49589 748 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 DNA2P51530 1060 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 GYS2P54840 703 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 CYFIP1Q7L576 1253 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 ASAP3Q8TDY4 903 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 PSPC1Q8WXF1 523 aaKnown RBP10.04□□□□□ -0.8
UBE3B-207ENST00000537063 NT5C1BQ96P26 610 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 ADGRA2Q96PE1 1338 aa10.04□□□□□ -0.8
UBE3B-207ENST00000537063 ZSCAN5CA6NGD5 496 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 TMCO5BA8MYB1 307 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 GRIN3BO60391 1043 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 FTLP02792 175 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 GLRA2P23416 452 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 GPC5P78333 572 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CDR2Q01850 454 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CLUL1Q15846 466 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 SLC47A2Q86VL8 602 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 MORC4Q8TE76 937 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 WHAMMQ8TF30 809 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CD101Q93033 1021 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 POP1Q99575 1024 aaKnown RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 EPB41L5Q9HCM4 733 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 A0A0U1RQG5 324 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 GOLGA6BA6NDN3 693 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CYP11B1P15538 503 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 ABCB4P21439 1286 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 GUCY2DQ02846 1103 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CUL1Q13616 776 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 MTERF2Q49AM1 385 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CRELD2Q6UXH1 353 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 FGD4Q96M96 766 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 GDAP1L1Q96MZ0 367 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 RPS6KC1Q96S38 1066 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 HAPLN2Q9GZV7 340 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 SPATC1LQ9H0A9 340 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 KCNH4Q9UQ05 1017 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 MIF4GDA9UHW6 222 aaKnown RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CYP26A1O43174 497 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 TGFB3P10600 412 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 POLGP54098 1239 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 ANKRD35Q8N283 1001 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 PPM1KQ8N3J5 372 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CNKSR2Q8WXI2 1034 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 CCDC127Q96BQ5 260 aa10.03□□□□□ -0.8
UBE3B-207ENST00000537063 TAF1DQ9H5J8 278 aaPredicted RBP10.03□□□□□ -0.8
UBE3B-207ENST00000537063 ZNF233A6NK53 670 aa10.02□□□□□ -0.8
UBE3B-207ENST00000537063 MOGSQ13724 837 aa10.02□□□□□ -0.8
UBE3B-207ENST00000537063 ZACNQ401N2 412 aa10.02□□□□□ -0.8
UBE3B-207ENST00000537063 TRMT1LQ7Z2T5 733 aaKnown RBP10.02□□□□□ -0.8
UBE3B-207ENST00000537063 NFU1Q9UMS0 254 aa10.02□□□□□ -0.8
UBE3B-207ENST00000537063 SART1O43290 800 aaKnown RBP10.02□□□□□ -0.81
UBE3B-207ENST00000537063 RPS6KA5O75582 802 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms