RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ATP2B1P20020 1258 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MCM7P33993 719 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GLUD2P49448 558 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 C15orf39Q6ZRI6 1047 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 OTOP3Q7RTS5 596 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 RNF168Q8IYW5 571 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 COLEC11Q9BWP8 271 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 TMEM60Q9H2L4 133 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 TUFT1Q9NNX1 390 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 DPP7Q9UHL4 492 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 SPTBN4Q9H254 2564 aa21.82■■□□□ 1.08
TNFRSF1B-204ENST00000536782 A0A1B0GUA9 196 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 LRRIQ4A6NIV6 560 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 TEX28O15482 410 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 NPTXRO95502 500 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 EFEMP2O95967 443 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 AKAP5P24588 427 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 NUBP1P53384 320 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 KIAA0319Q5VV43 1072 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ELMSAN1Q6PJG2 1045 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MAEAQ7L5Y9 396 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CDR2LQ86X02 465 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CATSPER3Q86XQ3 398 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MCPH1Q8NEM0 835 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 IRF2BPLQ9H1B7 796 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 SMOC2Q9H3U7 446 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GPRC5CQ9NQ84 441 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MAN1C1Q9NR34 630 aa21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 PTPRZ1P23471 2315 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1B-204ENST00000536782 TDRD15B5MCY1 1934 aaKnown RBP21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GUCY1B3Q02153 619 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 DSG1Q02413 1049 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ST3GAL1Q11201 340 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GSTCDQ8NEC7 633 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CMASQ8NFW8 434 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 PRIMPOLQ96LW4 560 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 NACC1Q96RE7 527 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 RXFP1Q9HBX9 757 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 PRMT7Q9NVM4 692 aaPredicted RBP21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 PARP2Q9UGN5 583 aa21.8■■□□□ 1.08
TNFRSF1B-204ENST00000536782 DOCK8Q8NF50 2099 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ZMYM2Q9UBW7 1377 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 F8W810 466 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MED24O75448 989 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GLUD1P00367 558 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GRIK3Q13003 919 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 PPP4R3CPQ6ZMV5 832 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ZBTB8OSQ8IWT0 167 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ERMNQ8TAM6 284 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 POLR3CQ9BUI4 534 aaPredicted RBP21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CHST7Q9NS84 486 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 WDR87Q6ZQQ6 2873 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 FAM186AA6NE01 2351 aa21.79■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MTCL1Q9Y4B5 1905 aaKnown RBP21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CCDC195A0A1B0GUA6 201 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 FUT10Q6P4F1 479 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 C8orf76Q96K31 380 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 KLK14Q9P0G3 267 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 LIMCH1Q9UPQ0 1083 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 DOCK6Q96HP0 2047 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 DMDP11532 3685 aa21.78■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ORC2Q13416 577 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 FAM187BQ17R55 369 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 USP41Q3LFD5 358 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CDCA2Q69YH5 1023 aaPredicted RBP21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 CYP26C1Q6V0L0 522 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 GPR62Q9BZJ7 368 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 C2orf40Q9H1Z8 148 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 MFSD1Q9H3U5 465 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 FZD8Q9H461 694 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 ADAM28Q9UKQ2 775 aa21.77■■□□□ 1.08
TNFRSF1B-204ENST00000536782 C1RP00736 705 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 OR52Z1P0C646 297 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RPA1P27694 616 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TDGQ13569 410 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ZNF174Q15697 407 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TMEM132AQ24JP5 1023 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 POTEGQ6S5H5 508 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 PADI6Q6TGC4 694 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CCDC83Q8IWF9 413 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 GPR65Q8IYL9 337 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 HDAC7Q8WUI4 952 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 STAMQ92783 540 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ATOH1Q92858 354 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 B3GALT6Q96L58 329 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 LLPHQ9BRT6 129 aaKnown RBP21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 RHOBTB2Q9BYZ6 727 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FOXP1Q9H334 677 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 FAM86C1Q9NVL1 165 aa21.76■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ARHGEF35A5YM69 484 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 N4BP3O15049 544 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 GALR2O43603 387 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 TADA2AO75478 443 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 SEC24BO95487 1268 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 SPATA31D3P0C874 917 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 MYBP10242 640 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 CREMQ03060 361 aa21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 ASTLQ6HA08 431 aaPredicted RBP21.75■■□□□ 1.07
TNFRSF1B-204ENST00000536782 SPATA31D4Q6ZUB0 917 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms