RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 CNGA1P29973 690 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 GPC3P51654 580 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 MAP2K1Q02750 393 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 CYP1B1Q16678 543 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 AADACL2Q6P093 401 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 SLC47A2Q86VL8 602 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 AGBL3Q8NEM8 1001 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 FBXO25Q8TCJ0 367 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 NTPCRQ9BSD7 190 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 GPRC5CQ9NQ84 441 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 UVRAGQ9P2Y5 699 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 PCDHA3Q9Y5H8 950 aa17.24■□□□□ 0.35
CHMP1A-202ENST00000535997 FAM170AA1A519 330 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CCDC169A6NNP5 214 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 WDR64B1ANS9 1081 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 PGM5Q15124 567 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 XKR9Q5GH70 373 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 FAM102BQ5T8I3 360 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CCDC137Q6PK04 289 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 ZDHHC24Q6UX98 284 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CROCCP2Q86T23 111 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 USP37Q86T82 979 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CBWD2Q8IUF1 395 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 TMEM161BQ8NDZ6 487 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CYFIP2Q96F07 1278 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 PGM2Q96G03 612 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 TAAR1Q96RJ0 339 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 EPB41L4BQ9H329 900 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 TMEM8AQ9HCN3 771 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CNOT8Q9UFF9 292 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 GTF3C4Q9UKN8 822 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 PNMA2Q9UL42 364 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 GOLGA8IPA6NC78 632 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 GOLGA8JA6NMD2 632 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 TMEM110-MUSTN1A8MSY1 372 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 PYGMP11217 842 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CYP11B1P15538 503 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 GTF2H1P32780 548 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 MARCKSL1P49006 195 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 RPS6P62753 249 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 KRT76Q01546 638 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 FMO1Q01740 532 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CDR2Q01850 454 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 UGCGQ16739 394 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 C6orf89Q6UWU4 347 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 MAP4K3Q8IVH8 894 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 ZDHHC14Q8IZN3 488 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 ZNF564Q8TBZ8 553 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 TMC2Q8TDI7 906 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 SEMA4DQ92854 862 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 CENPTQ96BT3 561 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 GRHL1Q9NZI5 618 aa17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 MTRF1LQ9UGC7 380 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-202ENST00000535997 PHF20L1A8MW92 1017 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 DCDC2CA8MYV0 355 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 FSBPO95073 299 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 MMEP08473 750 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 DENND2CQ68D51 928 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 SLC13A5Q86YT5 568 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 TTLL6Q8N841 843 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 HELQQ8TDG4 1101 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 KIFAP3Q92845 792 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 CCDC127Q96BQ5 260 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 NUP85Q9BW27 656 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 KIAA1683Q9H0B3 1180 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 VPS33BQ9H267 617 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 RAVER2Q9HCJ3 691 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 TMEM150BA6NC51 233 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 ANKRD63C9JTQ0 380 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 ATP9AO75110 1047 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 EIF2AK2P19525 551 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 NPTX2P47972 431 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 DMP1Q13316 513 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 RDM1Q8NG50 284 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 RAPGEF5Q92565 580 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 MFSD14AQ96MC6 490 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 FBXL18Q96ME1 805 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 NT5C1BQ96P26 610 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 FAM129AQ9BZQ8 928 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 TAOK3Q9H2K8 898 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
CHMP1A-202ENST00000535997 SPOPO43791 374 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 CAND2O75155 1236 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 RPL21P46778 160 aaKnown RBP17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 RWDD2BP57060 319 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 TTC27Q6P3X3 843 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 SPIRE2Q8WWL2 714 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 ZBED3Q96IU2 234 aaPredicted RBP17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 ACP6Q9NPH0 428 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 HOMER2Q9NSB8 354 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 RAB20Q9NX57 234 aa17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.35
CHMP1A-202ENST00000535997 CCNE2O96020 404 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms