RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 SLC16A3O15427 465 aaKnown RBP17■□□□□ 0.31
MCF2L-232ENST00000535094 FOSP01100 380 aaPredicted RBP17■□□□□ 0.31
MCF2L-232ENST00000535094 SERPINB2P05120 415 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 RARGP13631 454 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 CHKAP35790 457 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 TBC1D16Q8TBP0 767 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 KIFAP3Q92845 792 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 FAM20AQ96MK3 541 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 NACC1Q96RE7 527 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 LXNQ9BS40 222 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 PCDHAC2Q9Y5I4 1007 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 ASAP2O43150 1006 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 CD58P19256 250 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 DYNLT1P63172 113 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 CRYMQ14894 314 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 RASGEF1CQ8N431 466 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 TLCD1Q96CP7 247 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 KLF6Q99612 283 aaPredicted RBP17■□□□□ 0.31
MCF2L-232ENST00000535094 CHST7Q9NS84 486 aa17■□□□□ 0.31
MCF2L-232ENST00000535094 PFASO15067 1338 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 TMEM150BA6NC51 233 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SMIM24O75264 130 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 STRN3Q13033 797 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 ITIH4Q14624 930 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 LLGL2Q6P1M3 1020 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 PADI6Q6TGC4 694 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 LMNTD2Q8IXW0 634 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 LRRC37BQ96QE4 947 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 NUDCD1Q96RS6 583 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 TRPM3Q9HCF6 1732 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-232ENST00000535094 GHRP10912 638 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 CLUL1Q15846 466 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SYCP2LQ5T4T6 812 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SCYL3Q8IZE3 742 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SLC5A5Q92911 643 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 KIFC3Q9BVG8 833 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 RPTORQ8N122 1335 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 NUP98P52948 1817 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 NDUFB10O96000 172 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SHMT1P34896 483 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 NCALDP61601 193 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 AP3B2Q13367 1082 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 ZDHHC24Q6UX98 284 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 LONP2Q86WA8 852 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SPIRE2Q8WWL2 714 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 MCUR1Q96AQ8 359 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 ZNF317Q96PQ6 595 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-232ENST00000535094 RAB3IPQ96QF0 476 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-232ENST00000535094 KCNMB3Q9NPA1 279 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 SERPINA10Q9UK55 444 aa16.99■□□□□ 0.31
MCF2L-232ENST00000535094 A0A0G2JND7 137 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 POLR2MP0CAP2 368 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 TNNI1P19237 187 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 MARSP56192 900 aaKnown RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 ANKRD35Q8N283 1001 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 EIF1ADQ8N9N8 165 aaKnown RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 A1CFQ9NQ94 594 aaKnown RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 MYH3P11055 1940 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 MEIS2O14770 477 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 MGRN1O60291 552 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 NPEPPSP55786 919 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 GBP7Q8N8V2 638 aaPredicted RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 C1orf131Q8NDD1 294 aaKnown RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 ATXN2LQ8WWM7 1075 aaKnown RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 C11orf70Q9BRQ4 267 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 OSBPL1AQ9BXW6 950 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 GPRC5CQ9NQ84 441 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 ZDHHC18Q9NUE0 388 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 STXBP5LQ9Y2K9 1186 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 GOLGB1Q14789 3259 aaKnown RBP16.98■□□□□ 0.31
MCF2L-232ENST00000535094 RTN2O75298 545 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 MFAP3P55082 362 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 XKR9Q5GH70 373 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 IZUMO3Q5VZ72 239 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 MIGA2Q7L4E1 593 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 DTX3LQ8TDB6 740 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 POMGNT1Q8WZA1 660 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 SMC6Q96SB8 1091 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 WNT8AQ9H1J5 351 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 DNAJC18Q9H819 358 aa16.98■□□□□ 0.31
MCF2L-232ENST00000535094 BTNL10A8MVZ5 291 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 SPOCK2Q92563 424 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 ACSF2Q96CM8 615 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-232ENST00000535094 ZBTB10Q96DT7 871 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 CCDC17Q96LX7 622 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 RMDN2Q96LZ7 410 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 SPATS2LQ9NUQ6 558 aaKnown RBP16.97■□□□□ 0.31
MCF2L-232ENST00000535094 VCAM1P19320 739 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 OVGP1Q12889 678 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 LACTB2Q53H82 288 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-232ENST00000535094 PRR5LQ6MZQ0 368 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 SLFN11Q7Z7L1 901 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 ANKMY2Q8IV38 441 aa16.97■□□□□ 0.31
MCF2L-232ENST00000535094 XXYLT1Q8NBI6 393 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms