RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 MGAT5Q09328 741 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 FHL2Q14192 279 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 IQSEC1Q6DN90 963 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 Q6ZRM9 215 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 DOK3Q7L591 496 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 FAM83AQ86UY5 434 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 THNSL2Q86YJ6 484 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 PIK3C3Q8NEB9 887 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 OR5M3Q8NGP4 307 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 CHAC2Q8WUX2 184 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 RAX2Q96IS3 184 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 MNTQ99583 582 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 ENKD1Q9H0I2 346 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 ING3Q9NXR8 418 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 NOP58Q9Y2X3 529 aaKnown RBP5.37□□□□□ -1.55
ITGB1-219ENST00000534049 WASHC2AQ641Q2 1341 aa5.37□□□□□ -1.55
ITGB1-219ENST00000534049 WDR33Q9C0J8 1336 aaKnown RBP5.37□□□□□ -1.55
ITGB1-219ENST00000534049 KLRG2A4D1S0 409 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 CLGNO14967 610 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 TRIM24O15164 1050 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 GASTP01350 101 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 MCCP23508 829 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 GZMKP49863 264 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 MRPL49Q13405 166 aaKnown RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 TOB2Q14106 344 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 FSCN1Q16658 493 aaKnown RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 CT47A1Q5JQC4 288 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 SDE2Q6IQ49 451 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 CCDC62Q6P9F0 684 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 ELOA2Q8IYF1 753 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 MB21D1Q8N884 522 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 PUS7Q96PZ0 661 aaKnown RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 PRRX2Q99811 253 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 FDXACB1Q9BRP7 624 aaPredicted RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 ANO3Q9BYT9 981 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 TMPRSS11EQ9UL52 423 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 HDAC5Q9UQL6 1122 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 REXO2Q9Y3B8 237 aaKnown RBP5.36□□□□□ -1.55
ITGB1-219ENST00000534049 CDY2AQ9Y6F7 541 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 XDHP47989 1333 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 PRXQ9BXM0 1461 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 RAPGEF2Q9Y4G8 1499 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 GLI2P10070 1586 aa5.36□□□□□ -1.55
ITGB1-219ENST00000534049 CTTNBP2Q8WZ74 1663 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 KDM6BO15054 1643 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 KDM5BQ9UGL1 1544 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 TNIKQ9UKE5 1360 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 DNAJC6O75061 913 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 MTHFD2P13995 350 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 INHBCP55103 352 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 DGCR2P98153 550 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 SETQ01105 290 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-219ENST00000534049 DPTQ07507 201 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 RABL3Q5HYI8 236 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 FAM180AQ6UWF9 173 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 PDZD4Q76G19 769 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-219ENST00000534049 HDGFL2Q7Z4V5 671 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-219ENST00000534049 SYNE4Q8N205 404 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 CPPED1Q9BRF8 314 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-219ENST00000534049 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 SLITRK6Q9H5Y7 841 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 EVLQ9UI08 416 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-219ENST00000534049 PRKAB1Q9Y478 270 aa5.35□□□□□ -1.55
ITGB1-219ENST00000534049 ZCCHC11Q5TAX3 1644 aaKnown RBP5.34□□□□□ -1.55
ITGB1-219ENST00000534049 MAP3K4Q9Y6R4 1608 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 ABCA8O94911 1581 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 NEMP1O14524 444 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 PHF2O75151 1096 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 ENPP1P22413 925 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 CASRP41180 1078 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 STRN3Q13033 797 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 KLF10Q13118 480 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 UGT8Q16880 541 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 PITRM1Q5JRX3 1037 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 SLC41A1Q8IVJ1 513 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 SLC25A43Q8WUT9 341 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-219ENST00000534049 CDC5LQ99459 802 aaKnown RBP5.34□□□□□ -1.55
ITGB1-219ENST00000534049 PDCL3Q9H2J4 239 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 KCTD10Q9H3F6 313 aa5.34□□□□□ -1.55
ITGB1-219ENST00000534049 EPRSP07814 1512 aaKnown RBP5.33□□□□□ -1.56
ITGB1-219ENST00000534049 PTPRGP23470 1445 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 UACAQ9BZF9 1416 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 B5MCH6 92 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 PRAMEF4O60810 478 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 MGAT1P26572 445 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 CRHR1P34998 444 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 MRPS9P82933 396 aaKnown RBP5.33□□□□□ -1.56
ITGB1-219ENST00000534049 UBE3CQ15386 1083 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.33□□□□□ -1.56
ITGB1-219ENST00000534049 FNDC7Q5VTL7 733 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 LYSMD2Q8IV50 215 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 OR52N2Q8NGI0 321 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 SNX33Q8WV41 574 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 HAS1Q92839 578 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 LENG9Q96B70 501 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 FAM193BQ96PV7 902 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-219ENST00000534049 MS4A5Q9H3V2 200 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 MMRN2Q9H8L6 949 aa5.33□□□□□ -1.56
ITGB1-219ENST00000534049 TRPS1Q9UHF7 1281 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms